PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001181.1_g450.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 299aa MW: 34322.8 Da PI: 6.4235

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001181.1_g450.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.5	3.9e-22	67	152	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtklele 84 kfYn+YA+++GFs+r+s+ +k ++g+ +r fvC egkre +k+ ++ + +raetr+gC a++k++ + ++k++v+++++e Pav_sc0001181.1_g450.1.br 67 KFYNAYAYNIGFSIRRSSCHKF-KSGQLRDRLFVCFVEGKREIDKRV-SNVKYHRAETRCGCLARMKISCHLNEKYRVIEFVSE 148 6******************9.6777************9988.89999*************************** PP FAR1 85 HnHe 88 HnH Pav_sc0001181.1_g450.1.br 149 HNHV 152 *5 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MNMENNCMED GEGETSPGLN ISEGESNEKS SQAMKGNEKI DLVHSSIQKQ LIPVIGMEFE 60 TEDLAFKFYN AYAYNIGFSI RRSSCHKFKS GQLRDRLFVC FVEGKREIDK RVSNVKYHRA 120 ETRCGCLARM KISCHLNEKY RVIEFVSEHN HVTTSPSKTH LFRSHRKITL AQIAEVDMAD 180 SSGIAPKATL EFLSRQAGGR ESLGFIPDDY KNYLHSKRTR EMKLGDTGGV LEYLQQMQLN 240 DPNFFYAIQV DEDDLITNIF WADTRMMVDY DYFGDVVCFG EADKEEKNSK NRIATFKQC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-45	FAR1 family protein