PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001179.1_g010.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 158aa MW: 18280.4 Da PI: 7.0233 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 41.3 | 5e-13 | 82 | 131 | 38 | 91 |
FAR1 38 egkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 g+ +++ ++ +++r++ r gCka+l +k+++dgk++v++++ eHnH+l+p Pav_sc0001179.1_g010.1.br 82 RGFYRKK----TTPKKKREQRRFGCKAMLGIKLNRDGKYVVKNFVAEHNHDLVP 131 4444443....45689999********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence |
MQAHTATVLM DHEEDEFRAT YSNDGKESVD CIHLDSDSES LDLLDHNGQI EELTRKFGDV 60 PTLGMSFNNE QEAYQYYNSY ARGFYRKKTT PKKKREQRRF GCKAMLGIKL NRDGKYVVKN 120 FVAEHNHDLV PLSSSHLLRS QRTIEPSQVG FINQMHHA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 8e-14 | FAR1 family protein |