PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001109.1_g070.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 168aa MW: 19504.2 Da PI: 10.174 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 70.9 | 2.9e-22 | 47 | 133 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtklele 84 +fYn+YAke+GF vr+++s+k+k+++ei ++++vCske + + + ++r+r tr gCkakl+v k k+g+++v+ +++ Pav_sc0001109.1_g070.1.br 47 EFYNNYAKEAGFIVRINSSRKNKETNEILRKEYVCSKEEVPVKGVGE---KKRRRGITREGCKAKLVVVKLKSGTYVVNLFVEG 127 6*************************************999998766...9999****************************** PP FAR1 85 HnHela 90 Hn +l+ Pav_sc0001109.1_g070.1.br 128 HNRPLT 133 **9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MIYNYEPIRW QHGLNSDSCD KIYIPQLRDD HKPKSGQRFE SLDDAHEFYN NYAKEAGFIV 60 RINSSRKNKE TNEILRKEYV CSKEEVPVKG VGEKKRRRGI TREGCKAKLV VVKLKSGTYV 120 VNLFVEGHNR PLTSLKRVHL LRSHHTVSNS HKCITQLFST ANIPTHQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-20 | FAR1 family protein |