PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001076.1_g150.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 416aa MW: 47285.5 Da PI: 8.0147

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001076.1_g150.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.3	5.5e-23	55	144	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtklele 84 +fYn+YAke+GFsvr+++s+k+k+++ei ++++vCskeg +++ +++++r + e gCk kl v k+k+g+++v+ +++ Pav_sc0001076.1_g150.1.br 55 EFYNNYAKEAGFSVRINYSRKNKETNEILRKEYVCSKEGVPAKGVGEKKRHRGITREGCKGCKEKLAVVKSKSGTYVVSLFVEG 138 6****************************************9988556666666666677789*************** PP FAR1 85 HnHela 90 HnH+l+ Pav_sc0001076.1_g150.1.br 139 HNHPLT 144 **97 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MDYMAQELDG HSEGVGQYRL NSYSDSCDKI YIPQLRDDHK PKSVQGFESL DDAHEFYNNY 60 AKEAGFSVRI NYSRKNKETN EILRKEYVCS KEGVPAKGVG EKKRHRGITR EGCKGCKEKL 120 AVVKSKSGTY VVSLFVEGHN HPLTSPKRVH LLRSHRTVSN SHKCITQLFS AANIPTHQQF 180 SLLEMQVGGI ENVGCLEKDI YNNERNLRNG LKGHDADMLY EHFQLEHEKN LSFTFKIEAD 240 EEDRITHCFW VDTKSRKAYM FFGDVVVFDS TYNTNRYGMI FAPFVGVNNH GQTTVFACSF 300 LSDETTNSFL WLFEQFKKAM PGGSPKMIIT DQDPAMTKAI VQAFPNITHR ALVRQRHQEL 360 SADHIDKNEK PVLKLPLEMV FPSFRPGRPI EGVFGPSSFG CGAYHHQAPN LGLNGM

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MDYMAQELDG HSEGVGQYRL NSYSDSCDKI YIPQLRDDHK PKSVQGFESL DDAHEFYNNY  60
AKEAGFSVRI NYSRKNKETN EILRKEYVCS KEGVPAKGVG EKKRHRGITR EGCKGCKEKL  120
AVVKSKSGTY VVSLFVEGHN HPLTSPKRVH LLRSHRTVSN SHKCITQLFS AANIPTHQQF  180
SLLEMQVGGI ENVGCLEKDI YNNERNLRNG LKGHDADMLY EHFQLEHEKN LSFTFKIEAD  240
EEDRITHCFW VDTKSRKAYM FFGDVVVFDS TYNTNRYGMI FAPFVGVNNH GQTTVFACSF  300
LSDETTNSFL WLFEQFKKAM PGGSPKMIIT DQDPAMTKAI VQAFPNITHR ALVRQRHQEL  360
SADHIDKNEK PVLKLPLEMV FPSFRPGRPI EGVFGPSSFG CGAYHHQAPN LGLNGM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-65	FAR1 family protein