PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001046.1_g680.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 347aa MW: 39886.3 Da PI: 4.5151

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001046.1_g680.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	132.4	3.2e-41	16	147	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvka..eekewyfFskrdkkyatgkrknra 77 p GfrFhPt+eel+ +yLk+k +++++++ ++i+e+d +k++Pw++p + ++ ew+fFs+rd ky +++r+nra Pav_sc0001046.1_g680.1.br 16 PLGFRFHPTEEELL-DYLKNKRQDRDFNV-NHIPEIDTCKYDPWEIPGllfteqD--SpyHDMEWFFFSRRDYKYINSNRSNRA 95 89**********.**********.88***********54554332..144677***************** PP NAM 78 tksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 t +g Wk tgk++ + ++ +++++g k+t++fy+ pk++kt+Wvmhey+l Pav_sc0001046.1_g680.1.br 96 TPHGSWKITGKERMIRARgSNAVIGRKRTMTFYERCVPKSKKTNWVMHEYSL 147 *************9666779************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MGSKCYRKTT GGVPVPLGFR FHPTEEELLD YLKNKRQDRD FNVNHIPEID TCKYDPWEIP 60 GLLFTEQDSP YHDMEWFFFS RRDYKYINSN RSNRATPHGS WKITGKERMI RARGSNAVIG 120 RKRTMTFYER CVPKSKKTNW VMHEYSLFES EASPDPQLAE GLQLMQRDFV VCRLKKNPDK 180 KDTLVFAEGE PSSYNLCNCE DQAAADVTPE SQDHSPSTLQ SPAWIELGDV LQANGLNEDC 240 NDMQSPFGDN DYSVTDKNDI STCDEGEPHG FTVTNIENEV AYDMSQELYA QQEKNSYMLT 300 PQSPTFRNLE DFMYIDASDF GNQTANNLVL EVNPNILLGI YDTNFLV

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MGSKCYRKTT GGVPVPLGFR FHPTEEELLD YLKNKRQDRD FNVNHIPEID TCKYDPWEIP  60
GLLFTEQDSP YHDMEWFFFS RRDYKYINSN RSNRATPHGS WKITGKERMI RARGSNAVIG  120
RKRTMTFYER CVPKSKKTNW VMHEYSLFES EASPDPQLAE GLQLMQRDFV VCRLKKNPDK  180
KDTLVFAEGE PSSYNLCNCE DQAAADVTPE SQDHSPSTLQ SPAWIELGDV LQANGLNEDC  240
NDMQSPFGDN DYSVTDKNDI STCDEGEPHG FTVTNIENEV AYDMSQELYA QQEKNSYMLT  300
PQSPTFRNLE DFMYIDASDF GNQTANNLVL EVNPNILLGI YDTNFLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	9e-42	NAC family protein