PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001046.1_g670.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 436aa MW: 50138.4 Da PI: 4.3859 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 131.7 | 5.1e-41 | 16 | 147 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvka..eekewyfFskrdkkyatgkrknra 77 p GfrFhPt+eel+ +yLk+k +++++++ ++i+e+d +k++Pw++p + ++ ew+fFs+rd ky +++r+nra Pav_sc0001046.1_g670.1.br 16 PLGFRFHPTEEELL-DYLKNKRQDRDFNV-NHIPEIDTCKYDPWEIPGllfteqD--SpyHDMEWFFFSRRDYKYINSNRSNRA 95 89************.**************.88***************54554332..144677********************* PP NAM 78 tksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 t +g Wk tgk++ + ++ +++++g k+t++fy+ pk++kt+Wvmhey+l Pav_sc0001046.1_g670.1.br 96 TPHGSWKITGKERMIRARgSNAVIGRKRTMTFYERCVPKSKKTNWVMHEYSL 147 *****************9666779**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 436 aa Download sequence |
MGSKCYRKTT GGVPVPLGFR FHPTEEELLD YLKNKRQDRD FNVNHIPEID TCKYDPWEIP 60 GLLFTEQDSP YHDMEWFFFS RRDYKYINSN RSNRATPHGS WKITGKERMI RARGSNAVIG 120 RKRTMTFYER CVPKSKKTNW VMHEYSLFES EASPDPQLAE GLQLMQRDFV VCRLKKNPDK 180 KDTLVFAEGE PSSYNLCNCE DQAAADVTPE DHSPSTLQSP AWIELGDVLQ ANGLNEDCND 240 MQSPFGDNDY SVTDKNDIST CDEGEPHGFT VTNIENEVAY DMSQELYAQQ EKNSYMLTPQ 300 SPTFRNLEDF MYIDASDFGN QTANNMVLEQ AQDYHSFTLP SPIYSELGSV VPHVDVYNNE 360 WQSTYANFEN QTTNERISEE CPQPKENLRS ILSASQLADY TSQLLMNTEE CQMRPCEIGI 420 EGAAGMNWED SFFHFP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 3e-41 | NAC family protein |