PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001046.1_g660.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 292aa MW: 33655.7 Da PI: 6.1878 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 144.3 | 6.6e-45 | 15 | 148 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknrat 78 +p+GfrFhPt+eelv +yL+kk ++k+++++++i+e+ +k+ePwdLp ++ ew+fFs rd ky +++r+nrat Pav_sc0001046.1_g660.1.mk 15 VPVGFRFHPTEEELV-HYLRKKKQDKDFKVNHIIPEIAFCKHEPWDLPGllftepDSPYHDMEWFFFSLRDYKYMNSNRSNRAT 97 599************.**************999***************54565543333788********************** PP NAM 79 ksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++g Wk tgk++ + ++ ++ ++g k+tL+fy+gr pk++kt+Wvmhey l Pav_sc0001046.1_g660.1.mk 98 RKGHWKITGKERVIRARgSKVVIGRKRTLTFYEGRVPKSKKTNWVMHEYYL 148 ***************99555669**************************76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MGSKCNRKTT GGVSVPVGFR FHPTEEELVH YLRKKKQDKD FKVNHIIPEI AFCKHEPWDL 60 PGLLFTEPDS PYHDMEWFFF SLRDYKYMNS NRSNRATRKG HWKITGKERV IRARGSKVVI 120 GRKRTLTFYE GRVPKSKKTN WVMHEYYLIE DEANSNPKLA QRDFVLCRLK KKPDKKDTSI 180 CAEGEPSNCN LSNCEDQVAA VVTPESQDHS PSTLQSPASI ELGDVLQANG INEDCNEMQS 240 PFGDNEYHVT DNNDISTCDE GEPHGFTMSD FENEVADDMS REVRINLLFE YF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.2 | 2e-49 | NAC family protein |