PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001046.1_g660.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 292aa    MW: 33655.7 Da    PI: 6.1878
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001046.1_g660.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM144.36.6e-45151481128
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknrat 78 
                                +p+GfrFhPt+eelv +yL+kk ++k+++++++i+e+  +k+ePwdLp           ++ ew+fFs rd ky +++r+nrat
  Pav_sc0001046.1_g660.1.mk  15 VPVGFRFHPTEEELV-HYLRKKKQDKDFKVNHIIPEIAFCKHEPWDLPGllftepDSPYHDMEWFFFSLRDYKYMNSNRSNRAT 97 
                                599************.**************999***************54565543333788********************** PP

                        NAM  79 ksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                ++g Wk tgk++ + ++ ++ ++g k+tL+fy+gr pk++kt+Wvmhey l
  Pav_sc0001046.1_g660.1.mk  98 RKGHWKITGKERVIRARgSKVVIGRKRTLTFYEGRVPKSKKTNWVMHEYYL 148
                                ***************99555669**************************76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MGSKCNRKTT GGVSVPVGFR FHPTEEELVH YLRKKKQDKD FKVNHIIPEI AFCKHEPWDL  60
PGLLFTEPDS PYHDMEWFFF SLRDYKYMNS NRSNRATRKG HWKITGKERV IRARGSKVVI  120
GRKRTLTFYE GRVPKSKKTN WVMHEYYLIE DEANSNPKLA QRDFVLCRLK KKPDKKDTSI  180
CAEGEPSNCN LSNCEDQVAA VVTPESQDHS PSTLQSPASI ELGDVLQANG INEDCNEMQS  240
PFGDNEYHVT DNNDISTCDE GEPHGFTMSD FENEVADDMS REVRINLLFE YF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.22e-49NAC family protein