PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001046.1_g650.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 454aa    MW: 51032.2 Da    PI: 5.0615
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001046.1_g650.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM24.38.6e-084988248
                        NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
                                +GfrFhPt+ee+v + L+kk+eg++ ++   ++e+d   ++Pw+Lp
  Pav_sc0001046.1_g650.1.br 49 LRGFRFHPTEEEMV-NLLRKKMEGQSSQA---MPEID---YKPWNLP 88
                               68************.99********9666...78876...7899999 PP
2NAM88.11.6e-279521514128
                        NAM  14 lvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                                l  ++Lk+ ++gk  ++ ++i+e+d++k+eP+dL +        + + w+ Fs+ + k+ ++ r nratk+g+Wk tgk +e++
  Pav_sc0001046.1_g650.1.br  95 LFLRFLKQMMQGKASQACHIIPEIDVCKYEPSDLAEllfpDSPYQPRMWFSFSRPHYKSINSLRYNRATKKGFWKITGKPREIK 178
                                6779**********999999**************85455533447789************************************ PP

                        NAM  94 sk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                s+  +++++  k+tL+f++gr +k++ktdWvm+ey l
  Pav_sc0001046.1_g650.1.br 179 SQqlSKSVTCKKRTLTFHEGRVSKSTKTDWVMQEYYL 215
                                *976666677789**********************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    
MYVQEETLVG KPRTFGMKHK SKTTVTVLWL VVAGGMRSTT TEEWLLPLLR GFRFHPTEEE  60
MVNLLRKKME GQSSQAMPEI DYKPWNLPDN ESVSLFLRFL KQMMQGKASQ ACHIIPEIDV  120
CKYEPSDLAE LLFPDSPYQP RMWFSFSRPH YKSINSLRYN RATKKGFWKI TGKPREIKSQ  180
QLSKSVTCKK RTLTFHEGRV SKSTKTDWVM QEYYLTKTES GSIPNQLSDF VLCRMKNKSA  240
HYESDNKKLK DASICDESAD PGIGGYMASN SEADQAPANN MIPEADRHLA DKELEHDLPG  300
SGNHDAGEPG GCVSSDCDDM IQELSAQPGE YLDLPFPPPE PPEPGNASVP SPIGNNDSSL  360
PNKNNITTNY DSKPVSNTAS NFENQTKDEG TSEVYSQPEE DPESFLQLKL DDYTWLSRIL  420
QPEPGNLLHA NNSIGCNELQ SPYPETAALF PQSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.35e-27NAC family protein