PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001046.1_g620.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 103aa MW: 12040 Da PI: 9.8907 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 35.7 | 2.6e-11 | 18 | 94 | 13 | 85 |
NAM 13 elvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWka 85 l+ ++Lk+ ++gk ++ ++i+e+d++k+eP+dL + + + w+ Fs+ + k+ ++ r nra+k+g +a Pav_sc0001046.1_g620.1.br 18 SLILRFLKQMMQGKASQACHIIPEIDVCKYEPSDLAEllfpDSPYQPRMWFSFSRPHYKSINSLRYNRAAKKGKSQA 94 4899***********999999**************85455533447789********************99996444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 103 aa Download sequence |
MPEIDYKPWN LPDNESISLI LRFLKQMMQG KASQACHIIP EIDVCKYEPS DLAELLFPDS 60 PYQPRMWFSF SRPHYKSINS LRYNRAAKKG KSQASHKVVI LKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65910.1 | 9e-08 | NAC family protein |