PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001046.1_g560.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 460aa    MW: 51761.9 Da    PI: 4.3748
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001046.1_g560.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM132.52.9e-41191512128
                        NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratks 80 
                                 pGfrF Pt+e lv +yLkkk+egk+ ++ ++i+e+d++k+eP d p+      +  +e ew+fFs+ d ky++++r nrat++
  Pav_sc0001046.1_g560.1.mk  19 LPGFRFYPTEEVLVGYYLKKKIEGKDSNFRHIIPEIDVCKHEPCDVPAffeepDFPDHEMEWFFFSQPDYKYTNSTRCNRATDQ 102
                                69***************************999***************6455554444788************************ PP

                        NAM  81 gyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                g+ k tgk +e++++ +++++g k+tL+fy+gr pk++kt+W+mhey l
  Pav_sc0001046.1_g560.1.mk 103 GFYKITGKVREIKARrSKAVIGKKRTLTFYEGRVPKAKKTNWIMHEYYL 151
                                *************98566679**************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    
MSSISSTTME EGDAVPVVLP GFRFYPTEEV LVGYYLKKKI EGKDSNFRHI IPEIDVCKHE  60
PCDVPAFFEE PDFPDHEMEW FFFSQPDYKY TNSTRCNRAT DQGFYKITGK VREIKARRSK  120
AVIGKKRTLT FYEGRVPKAK KTNWIMHEYY LTNTELAQLG PNPNQQRDFV LCRLKNKSAN  180
YKKVKADSGS GSGGCIASNS EDDQAAATDM ISEPLEHLAS QEVGDVLNGN GDHDECTESP  240
NGTGLIDNND TSTCDDDEID TWIFYDFDNQ AACDLFQEYC AEPGENLDSP LPPPQPPLPP  300
LPQDYCSSTQ QSSLYTNQGN VPYVYDGECN RQQSPIGDRN SYLSHKNNMS MNNQIEPVSN  360
ITYGVQNQAT SESNSEVYNN STNDFKEPGS NITYNCNNGA PDERILEAVK FQGDGPKENL  420
GSRFDPFQLQ DFTLLSPMNS ELGDFEHGNK LYWHAMSCNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.15e-44NAC family protein