PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001046.1_g520.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 631aa MW: 71981.7 Da PI: 7.4542

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001046.1_g520.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	97.5	8.5e-31	118	222	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegD 78 f+kv tpsdv+k++rlv+pk++ae++ + ++ l ++d++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD Pav_sc0001046.1_g520.1.mk 118 FDKVVTPSDVGKLNRLVIPKQHAERYfpldstA--NDKGLLLNFQDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGD 199 89***********************999643..346779*************************************** PP EEEEEE-.SS.SEE..EEEEE-S CS B3 79 fvvFkld.gr.sefelvvkvfrk 99 +v F++ g+ + +l++ ++r+ Pav_sc0001046.1_g520.1.mk 200 VVSFERGvGDsGKDHLYIDWRRR 222 ***665887888999999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 631 aa Download sequence
MEFVQRDQKG YSDKEDQDQE DQEEEDIISS KFSSSSHNYN NSNYGSSPKY KATFVPPPPP 60 PLPHHHQYQQ RKPWAVHNHG SPEAINFMDL SLNHEQATAD GANNNNNWPP NSEREHMFDK 120 VVTPSDVGKL NRLVIPKQHA ERYFPLDSTA NDKGLLLNFQ DRTGKPWRFR YSYWNSSQSY 180 VMTKGWSRFV KEKKLDAGDV VSFERGVGDS GKDHLYIDWR RRPPPPPPPP HHQHHGQFGN 240 CNDRCGGGGG RLYSLLQRPP PSMMSMPLRH HDHFHPSNNV HHPYHHHHHQ IMNHQYLQHQ 300 IHHQLQVERD QVVHHHHQYP MVIDSVPFVQ HGKMSSSGAS AGASTGKRLR LFGVNMECSP 360 NVEEDRTDEH QYQILPSTAI PYNHLPSSSL SAPLELRLPN TIGANQIPLP NTAAAAQLGT 420 PFTGSAHPMA YNLGLGSTMD DDEHVTWLRC VECGGRMTTL FVQYSPGNIR LMKCGNCKAV 480 ADEYIECEPI IILIDLILHK TKAYTHLLYN VVDPQAPSFQ MLMDVVFGNI MFLSTFLLSM 540 RVLFSTFPRP LRYKDLLLAI FISSYFKMFL IAMMVWECPS VIFIIDLFVL SSNTVALKVI 600 TQSAMSRCIA ACFSAHVVKF LVTQRCWSWE L

Sequence ? help Back to Top

Protein Sequence Length: 631 aa Download sequence

MEFVQRDQKG YSDKEDQDQE DQEEEDIISS KFSSSSHNYN NSNYGSSPKY KATFVPPPPP  60
PLPHHHQYQQ RKPWAVHNHG SPEAINFMDL SLNHEQATAD GANNNNNWPP NSEREHMFDK  120
VVTPSDVGKL NRLVIPKQHA ERYFPLDSTA NDKGLLLNFQ DRTGKPWRFR YSYWNSSQSY  180
VMTKGWSRFV KEKKLDAGDV VSFERGVGDS GKDHLYIDWR RRPPPPPPPP HHQHHGQFGN  240
CNDRCGGGGG RLYSLLQRPP PSMMSMPLRH HDHFHPSNNV HHPYHHHHHQ IMNHQYLQHQ  300
IHHQLQVERD QVVHHHHQYP MVIDSVPFVQ HGKMSSSGAS AGASTGKRLR LFGVNMECSP  360
NVEEDRTDEH QYQILPSTAI PYNHLPSSSL SAPLELRLPN TIGANQIPLP NTAAAAQLGT  420
PFTGSAHPMA YNLGLGSTMD DDEHVTWLRC VECGGRMTTL FVQYSPGNIR LMKCGNCKAV  480
ADEYIECEPI IILIDLILHK TKAYTHLLYN VVDPQAPSFQ MLMDVVFGNI MFLSTFLLSM  540
RVLFSTFPRP LRYKDLLLAI FISSYFKMFL IAMMVWECPS VIFIIDLFVL SSNTVALKVI  600
TQSAMSRCIA ACFSAHVVKF LVTQRCWSWE L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46870.1	3e-60	B3 family protein