PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001046.1_g470.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 921aa MW: 101335 Da PI: 6.8674

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001046.1_g470.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51	3.2e-16	82	126	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ +++da k++G W +I +++g ++t+ q++s+ qk+ Pav_sc0001046.1_g470.1.mk 82 RERWTEEEHNRFLDALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 126 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 921 aa Download sequence
MLLAHNNWSF WCVGTDVASP SQLFFSRTTK TALLVLNLAA FTNERRFLFY PLLVREDLKQ 60 RKLRGSGNGH TARKPYTITK QRERWTEEEH NRFLDALKLY GRAWQRIEEH IGTKTAVQIR 120 SHAQKFFSKV HYSSIAVTVT MMSSHLAMKN YEAFTDSCKC YSGIEAFGVK AADSEKLLHL 180 CMSFQCNTFL VAYSWKVGNN FQFPTTILFI STLLDHTMRF CFQLEKEAHN KGVPAGQSID 240 IDIPPPRPKR KPSNPYPRKS SSAAPTWATS HVAAKDGKLL SSTSSSHCKQ VVDLEKEPLD 300 ERPTKEDNPR KGKENRDENC AEVLTMLLED HCSSVSSANK NYIPTQVALR NACTFREFVP 360 SLKGVISQDV TNDSYVTTEL NGNQNLKKND AKKIVQDNGT SGASESENTN AFRKKLVQGE 420 KADDLNCALP TDGMQGTQTY PRNVPVHVLD GSLGACNQIT PADMSFTDTA FHPMGKVHGQ 480 PNLFANPTAS TTTEHESNAS RSSVHQSFPA FHPPFTPFHH GQKDYQSFLH ISSTFSSLIV 540 SSLLQNPAAH AAASFAATFW PYANAENTED SPACPPGGFP SRQMNSPPSM AAIAAATVAA 600 ASAWWASHGL LPLCAPVQTA FSCPPVSMTG VPSMDTGEAP AAKIERGENS LQFPSLQDQQ 660 VDPEHLEAVE AQHPASKSPS VSSSHSDNGG AEPNTVLKAA ADEKVVASTE DVNDSNNAKS 720 RKQVDRSSCG SNTPSSSEVE TDALEKQEKG EEELKEPDLN HPPSDSTYRR SRSIINISDP 780 WKEVSEEGRM AFQALFSREV LPQSFSPPPK DEEHQTTTKE GKQNAEEKDE DASLLDLNKK 840 TWVSFSCHPE VEKNVSPVGD NNAEGLLTIG LSQGKLKARR TGFKPYKRCS VEANENRAAN 900 AISHCEEKGP KRLRLEGEAQ T

Sequence ? help Back to Top

Protein Sequence Length: 921 aa Download sequence

MLLAHNNWSF WCVGTDVASP SQLFFSRTTK TALLVLNLAA FTNERRFLFY PLLVREDLKQ  60
RKLRGSGNGH TARKPYTITK QRERWTEEEH NRFLDALKLY GRAWQRIEEH IGTKTAVQIR  120
SHAQKFFSKV HYSSIAVTVT MMSSHLAMKN YEAFTDSCKC YSGIEAFGVK AADSEKLLHL  180
CMSFQCNTFL VAYSWKVGNN FQFPTTILFI STLLDHTMRF CFQLEKEAHN KGVPAGQSID  240
IDIPPPRPKR KPSNPYPRKS SSAAPTWATS HVAAKDGKLL SSTSSSHCKQ VVDLEKEPLD  300
ERPTKEDNPR KGKENRDENC AEVLTMLLED HCSSVSSANK NYIPTQVALR NACTFREFVP  360
SLKGVISQDV TNDSYVTTEL NGNQNLKKND AKKIVQDNGT SGASESENTN AFRKKLVQGE  420
KADDLNCALP TDGMQGTQTY PRNVPVHVLD GSLGACNQIT PADMSFTDTA FHPMGKVHGQ  480
PNLFANPTAS TTTEHESNAS RSSVHQSFPA FHPPFTPFHH GQKDYQSFLH ISSTFSSLIV  540
SSLLQNPAAH AAASFAATFW PYANAENTED SPACPPGGFP SRQMNSPPSM AAIAAATVAA  600
ASAWWASHGL LPLCAPVQTA FSCPPVSMTG VPSMDTGEAP AAKIERGENS LQFPSLQDQQ  660
VDPEHLEAVE AQHPASKSPS VSSSHSDNGG AEPNTVLKAA ADEKVVASTE DVNDSNNAKS  720
RKQVDRSSCG SNTPSSSEVE TDALEKQEKG EEELKEPDLN HPPSDSTYRR SRSIINISDP  780
WKEVSEEGRM AFQALFSREV LPQSFSPPPK DEEHQTTTKE GKQNAEEKDE DASLLDLNKK  840
TWVSFSCHPE VEKNVSPVGD NNAEGLLTIG LSQGKLKARR TGFKPYKRCS VEANENRAAN  900
AISHCEEKGP KRLRLEGEAQ T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.4	8e-62	MYB_related family protein