PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001031.1_g120.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 564aa MW: 66645.8 Da PI: 7.1124

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001031.1_g120.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	44.1	6.6e-14	40	97	1	58
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraet 58 +fYn+YAk+vGFsvr+sk+kk+k++ e++++++vC keg+++e+ +k++++++t+ e Pav_sc0001031.1_g120.1.br 40 EFYNDYAKDVGFSVRISKEKKKKETSEVVWKRYVCFKEGETDETWRKKKDSESTQIER 97 6****************************************99988844444333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MANALDEWMS SKDEFYIPQV RDDKKPKAGL TFKSLDETYE FYNDYAKDVG FSVRISKEKK 60 KKETSEVVWK RYVCFKEGET DETWRKKKDS ESTQIERERD TKIKLVKKFS NVNIPLYQQF 120 KLLETQAGGH ESVGFIERDL RNFERDEREK IKGHDAEMLY EYFKSEEDKD SDFFFKFETD 180 NHNKMTRCFW VDSVARKDYT HFGDVVVFDT TYNTNRYAMI FAPLVGVNHH RQTTIFGCGF 240 LSNETFDSFV WLLETWLEAM KVPPIVIITD QDQAMTKAIA QSWYEALEIS QPSSKEWFEE 300 MYKLRGTWIP AYVKQYFSAE MSSSQRAESM HAFFKRYCSK SNSLMDFVTR FNRALAHLRH 360 EELVADHGDL NEKPNIKLGM PMENQMVGMY TKKYFYKFQK ELLESNSYMV NVTGEDEKCW 420 IYKIQKFDAN SRVRTLVHDK ISNLLKCSCR LFDFEDHGDL NEKPNIKLGM PMENQMVGMY 480 TKKYFYKFQK ELLESNSYMV NVTGEDEKCW IYKIQKFDAN SRVYITAKLN KFALNTSFGS 540 SARLAFTPTP ILSESDRICR VIQA

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MANALDEWMS SKDEFYIPQV RDDKKPKAGL TFKSLDETYE FYNDYAKDVG FSVRISKEKK  60
KKETSEVVWK RYVCFKEGET DETWRKKKDS ESTQIERERD TKIKLVKKFS NVNIPLYQQF  120
KLLETQAGGH ESVGFIERDL RNFERDEREK IKGHDAEMLY EYFKSEEDKD SDFFFKFETD  180
NHNKMTRCFW VDSVARKDYT HFGDVVVFDT TYNTNRYAMI FAPLVGVNHH RQTTIFGCGF  240
LSNETFDSFV WLLETWLEAM KVPPIVIITD QDQAMTKAIA QSWYEALEIS QPSSKEWFEE  300
MYKLRGTWIP AYVKQYFSAE MSSSQRAESM HAFFKRYCSK SNSLMDFVTR FNRALAHLRH  360
EELVADHGDL NEKPNIKLGM PMENQMVGMY TKKYFYKFQK ELLESNSYMV NVTGEDEKCW  420
IYKIQKFDAN SRVRTLVHDK ISNLLKCSCR LFDFEDHGDL NEKPNIKLGM PMENQMVGMY  480
TKKYFYKFQK ELLESNSYMV NVTGEDEKCW IYKIQKFDAN SRVYITAKLN KFALNTSFGS  540
SARLAFTPTP ILSESDRICR VIQA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	59	88	KKKKETSEVVWKRYVCFKEGETDETWRKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-65	FAR1 family protein