PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001031.1_g010.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CAMTA

Protein Properties

Length: 914aa MW: 103068 Da PI: 7.2768

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001031.1_g010.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	162.6	7e-51	26	142	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyY 85 +e k+rwl+++ei+aiL n++ +++ ++ + pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg e +++yY Pav_sc0001031.1_g010.1.mk 26 EEaKSRWLRPNEIHAILYNYKYFTIYVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGYEERIHVYY 109 4559****************************************************************************** PP CG-1 86 ahseenptfqrrcywlLeeelekivlvhylevk 118 ah+e+ ptf rrcywlL+++le+ivlvhy+e++ Pav_sc0001031.1_g010.1.mk 110 AHGEDSPTFVRRCYWLLDKSLEHIVLVHYRETQ 142 ****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 914 aa Download sequence
MEKQLGGSEI HGFHTMQDLD VGTIMEEAKS RWLRPNEIHA ILYNYKYFTI YVKPVNLPKS 60 GTIVLFDRKM LRNFRKDGHN WKKKKDGKTV KEAHEHLKVG YEERIHVYYA HGEDSPTFVR 120 RCYWLLDKSL EHIVLVHYRE TQELQGSPVT PVNSNNSSSV SDPSAPWLLS EELDSGANKA 180 YCAGENELSE PGDGLTVKNH EKRLHDINTL EWEELLITND SKGDIGSCYD QQNQVVGNGF 240 ISGGASVISA EMSAFGNLTN PTLSCDNIQF NLPDSPYVPT VGYDVNSNVQ IRDSIAKTTC 300 DSLDVLVNDG LHSQDSFGRW INQVMADPPG SVEDPALESS SLAAQNSFAS PSADHLQSSV 360 PQQIFNITDL SPAWAFSNEK TKILITGFFH QEYLHLAKSD LLCICGDVCL RAEIVQAGVY 420 RCFVPPHLPR VVNLFMSIDG HKPISLVLNF EYRAPVLSDP IISLEENKRE EFQAQMRLAY 480 LLFSSSKSLN IISNKVSPNA LKEAKKFSHR TSHISNSWAY LMKAVEDNKT PLPLAKDGLF 540 ELILKNRLKD WLLEKVVDSS TTKEYDAHGQ GVIHLCAILE YAWAVRLFSW SGLSLDFRDR 600 RGWTALHWAA YCGREKMVAV LLSAGAKPNL VTDPSSENPG GCTAADLAAL KGYDGLAAYL 660 SEKALVEQFK DMSIAGNASG SLQTSSNYAG NSENLSEDEI YLKDTLTAYR TAADAAARIQ 720 AAFRENSLKL KAKAVQYSTP EAEARGIIAA LKIQHAFRNF DTRKKIKAAA HIQYRFRTWK 780 MRQEFLSLRR QAIKIQAAFR GFQVRKQYRK VLWSVGVLEK AVLRWRLKRR GLRGLNVAPV 840 EVDLDQKQES DTEEDFYRAS RKQAEERIER SVVRVQAMFR SKKAQEEYSR MKLTHIEAKL 900 EFEELLDPDS NMDN

Sequence ? help Back to Top

Protein Sequence Length: 914 aa Download sequence

MEKQLGGSEI HGFHTMQDLD VGTIMEEAKS RWLRPNEIHA ILYNYKYFTI YVKPVNLPKS  60
GTIVLFDRKM LRNFRKDGHN WKKKKDGKTV KEAHEHLKVG YEERIHVYYA HGEDSPTFVR  120
RCYWLLDKSL EHIVLVHYRE TQELQGSPVT PVNSNNSSSV SDPSAPWLLS EELDSGANKA  180
YCAGENELSE PGDGLTVKNH EKRLHDINTL EWEELLITND SKGDIGSCYD QQNQVVGNGF  240
ISGGASVISA EMSAFGNLTN PTLSCDNIQF NLPDSPYVPT VGYDVNSNVQ IRDSIAKTTC  300
DSLDVLVNDG LHSQDSFGRW INQVMADPPG SVEDPALESS SLAAQNSFAS PSADHLQSSV  360
PQQIFNITDL SPAWAFSNEK TKILITGFFH QEYLHLAKSD LLCICGDVCL RAEIVQAGVY  420
RCFVPPHLPR VVNLFMSIDG HKPISLVLNF EYRAPVLSDP IISLEENKRE EFQAQMRLAY  480
LLFSSSKSLN IISNKVSPNA LKEAKKFSHR TSHISNSWAY LMKAVEDNKT PLPLAKDGLF  540
ELILKNRLKD WLLEKVVDSS TTKEYDAHGQ GVIHLCAILE YAWAVRLFSW SGLSLDFRDR  600
RGWTALHWAA YCGREKMVAV LLSAGAKPNL VTDPSSENPG GCTAADLAAL KGYDGLAAYL  660
SEKALVEQFK DMSIAGNASG SLQTSSNYAG NSENLSEDEI YLKDTLTAYR TAADAAARIQ  720
AAFRENSLKL KAKAVQYSTP EAEARGIIAA LKIQHAFRNF DTRKKIKAAA HIQYRFRTWK  780
MRQEFLSLRR QAIKIQAAFR GFQVRKQYRK VLWSVGVLEK AVLRWRLKRR GLRGLNVAPV  840
EVDLDQKQES DTEEDFYRAS RKQAEERIER SVVRVQAMFR SKKAQEEYSR MKLTHIEAKL  900
EFEELLDPDS NMDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein