PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001003.1_g300.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 265aa MW: 29656.7 Da PI: 5.4499

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001003.1_g300.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.7	6.1e-09	13	43	1	31
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartm 31 rg W++eEde l++ ++ +G g+W++I++ Pav_sc0001003.1_g300.1.mk 13 RGLWSPEEDEMLINHINTYGHGSWSSIPKLA 43 788************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MGHKCCSKQK VKRGLWSPEE DEMLINHINT YGHGSWSSIP KLADPNTHNL LPSSKTNHST 60 NNNNISECSF YPTLPKPSYF FPVNSHVSDT SIDILKAHFQ ALSSISSSPD TNHINPDHSL 120 HGSSTLSSVY EYRNHNTAWT LQEKLNSNAF MEALNQPSAG ASVPTSSCHS YPLSELEIVN 180 ENCKWGTGNF EPSKPDQEMF MQPQKEKACE VGIEKANMLI DEQTNMDASF GSSNSDFDFV 240 ESTQLPYGLY NYHLSPMMDQ LQWNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13890.1	1e-18	MYB family protein