PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000999.1_g090.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 378aa MW: 42475.2 Da PI: 4.6639

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000999.1_g090.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	88.9	9.1e-28	19	139	14	128
NAM 14 lvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l ++Lk+ ++gk ++ ++i+e+d++k+eP+dL + + + w+ Fs+ + k+ ++ r nratk+g+Wk tgk +e++ Pav_sc0000999.1_g090.1.br 19 LFLRFLKQMMQGKASQACHIIPEIDVCKYEPSDLAEllfpDSPYQPTMWFSFSRPHYKSINSLRYNRATKKGFWKITGKPREIK 102 66789*******999999**********85455533447789********************************** PP NAM 94 sk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 s+ +++++ k+tL+f++gr +k++ktdWvm+ey l Pav_sc0000999.1_g090.1.br 103 SQqlSKSVTCKKRTLTFHEGRVSKSTKTDWVMQEYYL 139 976666677789*********************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MPEIDYKSWN LPDNESISLF LRFLKQMMQG KASQACHIIP EIDVCKYEPS DLAELLFPDS 60 PYQPTMWFSF SRPHYKSINS LRYNRATKKG FWKITGKPRE IKSQQLSKSV TCKKRTLTFH 120 EGRVSKSTKT DWVMQEYYLT QTEPGSIPNR LSDFVLCRMK NKSAHYESDN KKLKDASICD 180 ESADPGIGGY MASNSEDDQA PANNMIPEAD RHLADKELEH DLPGSGNHDA GEPGGCVSSD 240 CDDMIQELSA QPGEYLDLPF PPPEPPEPGN ASVPSPIGNN DSSLPNKNNI TTNYDSKPVS 300 NTASNFENQT KDERTSEVYS QPEEYPESFL QLKLDDYTWL SRILQPEPGN LLHANNSIGC 360 NELQSPYPET AALFPQSS

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MPEIDYKSWN LPDNESISLF LRFLKQMMQG KASQACHIIP EIDVCKYEPS DLAELLFPDS  60
PYQPTMWFSF SRPHYKSINS LRYNRATKKG FWKITGKPRE IKSQQLSKSV TCKKRTLTFH  120
EGRVSKSTKT DWVMQEYYLT QTEPGSIPNR LSDFVLCRMK NKSAHYESDN KKLKDASICD  180
ESADPGIGGY MASNSEDDQA PANNMIPEAD RHLADKELEH DLPGSGNHDA GEPGGCVSSD  240
CDDMIQELSA QPGEYLDLPF PPPEPPEPGN ASVPSPIGNN DSSLPNKNNI TTNYDSKPVS  300
NTASNFENQT KDERTSEVYS QPEEYPESFL QLKLDDYTWL SRILQPEPGN LLHANNSIGC  360
NELQSPYPET AALFPQSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.3	1e-23	NAC family protein