PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000979.1_g130.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 374aa MW: 40522.1 Da PI: 5.1694

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000979.1_g130.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.7	1.1e-17	49	94	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+W++eEd l ++v ++G ++W++Iar ++ gR++k+c++rw + Pav_sc0000979.1_g130.1.mk 49 RGPWSPEEDAVLSRLVSKFGARNWSLIARGIP-GRSGKSCRLRWCNQ 94 89****************************.*********985 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MTVPNDAVPK QGDDRPAESE LVRGTEAELI ELGDATELNE GALSSGKVRG PWSPEEDAVL 60 SRLVSKFGAR NWSLIARGIP GRSGKSCRLR WCNQLDPCVK RKPFSDASFD RTKASSEETL 120 SVGNISSFNT PEGREVLMDN RLDQLDEIVQ AKEGCGAAES NYHSTVLAGS RGHPTLLGES 180 KEQSSLCRPV ARVSAFSVYD HPSGPANTST FSRIVPSHGP LGQTCKLDFG FGNFHEGVCN 240 EPMVPLRCGH GCCDLSEGHS RSSLLGPEFV EYDEPPSFSS HELISIATDL NKIAWIKSGL 300 ENNGTRITEN AASQRVSQGA TTTSQMGLSV HNSTNDQMRY EEGRNKLMGM MTEVLSTQVP 360 RQTFAMPTEV EGLS

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MTVPNDAVPK QGDDRPAESE LVRGTEAELI ELGDATELNE GALSSGKVRG PWSPEEDAVL  60
SRLVSKFGAR NWSLIARGIP GRSGKSCRLR WCNQLDPCVK RKPFSDASFD RTKASSEETL  120
SVGNISSFNT PEGREVLMDN RLDQLDEIVQ AKEGCGAAES NYHSTVLAGS RGHPTLLGES  180
KEQSSLCRPV ARVSAFSVYD HPSGPANTST FSRIVPSHGP LGQTCKLDFG FGNFHEGVCN  240
EPMVPLRCGH GCCDLSEGHS RSSLLGPEFV EYDEPPSFSS HELISIATDL NKIAWIKSGL  300
ENNGTRITEN AASQRVSQGA TTTSQMGLSV HNSTNDQMRY EEGRNKLMGM MTEVLSTQVP  360
RQTFAMPTEV EGLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55730.1	3e-44	MYB family protein