PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000978.1_g040.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 355aa MW: 40572.8 Da PI: 6.6829

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000978.1_g040.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.2	1.5e-09	283	317	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++e+ LA+++gL+++q+ +WF N+R ++ Pav_sc0000978.1_g040.1.mk 283 KWPYPSESEKVALAESTGLDQKQINNWFINQRKRH 317 669*****************************885 PP
2	ELK	36.1	1.4e-12	237	258	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsgyL+sLkqE+s Pav_sc0000978.1_g040.1.mk 237 ELKNHLLKKYSGYLSSLKQELS 258 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MEEYNQMDHE SSGGRGNFLY ASPNLGGNYG RASHDHQMGI NAFHLQSSGG GDFHSPGGAH 60 PINVKTEAST SHHGHHKFQY NNNNNNNNNN PLLSSRGHQP VVQQQHNLDR QNDDHTLSSN 120 EVEAIKAKII AHPQQRSSVA SREASKDPEL DQFMEAYYDM LVKYREELTR PIQEAMDFMR 180 RIETQLNMLG NNNAPPLRIF SPSEDKCEGI GSSEEEQENS GGETEVPEID PRAEDRELKN 240 HLLKKYSGYL SSLKQELSKK KKKGKLPKDA RQKLLSWWEL HYKWPYPSES EKVALAESTG 300 LDQKQINNWF INQRKRHWKP SEDMQFMVMD GLHPQNAALY MDGHYIGDGH YRLGP

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MEEYNQMDHE SSGGRGNFLY ASPNLGGNYG RASHDHQMGI NAFHLQSSGG GDFHSPGGAH  60
PINVKTEAST SHHGHHKFQY NNNNNNNNNN PLLSSRGHQP VVQQQHNLDR QNDDHTLSSN  120
EVEAIKAKII AHPQQRSSVA SREASKDPEL DQFMEAYYDM LVKYREELTR PIQEAMDFMR  180
RIETQLNMLG NNNAPPLRIF SPSEDKCEGI GSSEEEQENS GGETEVPEID PRAEDRELKN  240
HLLKKYSGYL SSLKQELSKK KKKGKLPKDA RQKLLSWWEL HYKWPYPSES EKVALAESTG  300
LDQKQINNWF INQRKRHWKP SEDMQFMVMD GLHPQNAALY MDGHYIGDGH YRLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-94	TALE family protein