PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pav_sc0000907.1_g330.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | TALE | ||||||||
Protein Properties | Length: 333aa MW: 37582.1 Da PI: 4.9058 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 27.5 | 5.4e-09 | 264 | 296 | 23 | 55 |
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ee+ +L++ +gL+++q+ +WF N+R ++ Pav_sc0000907.1_g330.1.mk 264 PYPTEEEKLHLSEVTGLDQKQINNWFINQRKRH 296 8*****************************885 PP | |||||||
2 | ELK | 36.7 | 8.7e-13 | 216 | 237 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsgyL++L++EF+ Pav_sc0000907.1_g330.1.mk 216 ELKDMLLHKYSGYLSNLRKEFL 237 9********************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 333 aa Download sequence |
MNMEDFYRLN PGVISGSEID VNVVHQVENM ATSTSNTSCG FHGHPHHQGH VVDDNMLLFQ 60 TEGMGSDHHM SDLIKTQIAN HPRFPDLVDA YLECQKVGAP PEMKSLLEEI GRVSHPMSTC 120 SEIGADPELD EFMESYCEVL RGYKEELSKP FDEATNFLTN IQSQLRNLCK GTFPKTSWDC 180 NSDEGVGSSE EEFSCGEVEA AESQETAAAR AGGDRELKDM LLHKYSGYLS NLRKEFLKKR 240 KKGKLPKDAR TALLDWWTTH YRWPYPTEEE KLHLSEVTGL DQKQINNWFI NQRKRHWKPS 300 EDMRFALMEG VGGSIGAPML FDAGVGTGNI DDM |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 232 | 241 | LRKEFLKKRK |
2 | 238 | 242 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G23380.1 | 8e-79 | TALE family protein |