PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000907.1_g330.1.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family TALE
Protein Properties Length: 333aa    MW: 37582.1 Da    PI: 4.9058
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000907.1_g330.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.55.4e-092642962355
                                SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
                   Homeobox  23 rypsaeereeLAkklgLterqVkvWFqNrRake 55 
                                +yp++ee+ +L++ +gL+++q+ +WF N+R ++
  Pav_sc0000907.1_g330.1.mk 264 PYPTEEEKLHLSEVTGLDQKQINNWFINQRKRH 296
                                8*****************************885 PP

2ELK36.78.7e-13216237122
                        ELK   1 ELKhqLlrKYsgyLgsLkqEFs 22 
                                ELK++Ll+KYsgyL++L++EF+
  Pav_sc0000907.1_g330.1.mk 216 ELKDMLLHKYSGYLSNLRKEFL 237
                                9********************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MNMEDFYRLN PGVISGSEID VNVVHQVENM ATSTSNTSCG FHGHPHHQGH VVDDNMLLFQ  60
TEGMGSDHHM SDLIKTQIAN HPRFPDLVDA YLECQKVGAP PEMKSLLEEI GRVSHPMSTC  120
SEIGADPELD EFMESYCEVL RGYKEELSKP FDEATNFLTN IQSQLRNLCK GTFPKTSWDC  180
NSDEGVGSSE EEFSCGEVEA AESQETAAAR AGGDRELKDM LLHKYSGYLS NLRKEFLKKR  240
KKGKLPKDAR TALLDWWTTH YRWPYPTEEE KLHLSEVTGL DQKQINNWFI NQRKRHWKPS  300
EDMRFALMEG VGGSIGAPML FDAGVGTGNI DDM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1232241LRKEFLKKRK
2238242KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G23380.18e-79TALE family protein