PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000893.1_g1070.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 181aa MW: 20605.9 Da PI: 9.8152 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 72.4 | 9.8e-23 | 31 | 118 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkle 82 k+Yn YAk++GF vr ++k+s+ +ge+++++fvCsk+g++e++ + ++r+r rtgC akl v k + ++k+ v k++ Pav_sc0000893.1_g1070.1.br 31 KMYNVYAKKAGFGVRCYTTKTSRVTGEVVRKEFVCSKQGHTESKVGR---KKRRRGCVRTGCMAKLAVLKPYeKNKYTVVKFK 110 68***************************************998766...999999***********999988********** PP FAR1 83 leHnHela 90 +eHnHe++ Pav_sc0000893.1_g1070.1.br 111 EEHNHEMT 118 *****986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
MESELEVTPE VSVEFKPQVG LEFDSLEDVL KMYNVYAKKA GFGVRCYTTK TSRVTGEVVR 60 KEFVCSKQGH TESKVGRKKR RRGCVRTGCM AKLAVLKPYE KNKYTVVKFK EEHNHEMTAY 120 DKVHLLRSHR KLTDSTKVYN AHLSEVNISV HQQVSLLEVL AGGLENIGFK LTSHRSICLV 180 V |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 77 | 103 | RKKRRRGCVRTGCMAKLAVLKPYEKNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 6e-17 | FAR1 family protein |