PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000890.1_g990.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 233aa MW: 25812.7 Da PI: 10.6375 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 38.6 | 1.9e-12 | 15 | 90 | 10 | 90 |
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsef 90 + + rl+lp f+++ +++k + ++ + sW v++ ++ ++ +++GW+eFv+ +gLk g++++Fk++g++ f Pav_sc0000890.1_g990.1.mk 15 GF-NTRLSLPVAFCSSLSENKLD--KAVI-KSCLGSWHVRV--GRTVDGvLSFEEGWEEFVNHHGLKLGEILIFKHNGKRVF 90 44.457********999766433..3444.556689*****..666666599***********************9886666 PP | |||||||
2 | B3 | 54.8 | 1.7e-17 | 131 | 212 | 8 | 85 |
-HHHHT.T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE......EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 8 sdvlks.grlvlpkkfaeehggkkeesktltledesgrsWevkliy....rkksgr.yvltkGWkeFvkangLkegDfvvFkld 85 s+ + + l++p +fa+++g++ ++ ++l+d+sgrsW + l+ +++s r + t+GW +F +an+Lk gD+++F+l+ Pav_sc0000890.1_g990.1.mk 131 SHGDPHkAYLTIPARFARSNGIVATS--RIILKDLSGRSWPLILSRwesiSRGSHRiAIRTNGWYKFYEANKLKNGDVCTFSLK 212 4444443789***********99766..6***************66476644444457778********************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MAVKCSKFFK FLAPGFNTRL SLPVAFCSSL SENKLDKAVI KSCLGSWHVR VGRTVDGVLS 60 FEEGWEEFVN HHGLKLGEIL IFKHNGKRVF NVVAYEALGS EKGYDSKGKS PSEATASSTS 120 RTSFVCTMKK SHGDPHKAYL TIPARFARSN GIVATSRIIL KDLSGRSWPL ILSRWESISR 180 GSHRIAIRTN GWYKFYEANK LKNGDVCTFS LKPVSSKSGS KSARVMDVQI TRG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31680.1 | 2e-18 | B3 family protein |