PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000890.1_g920.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 283aa MW: 30169.3 Da PI: 6.2172

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000890.1_g920.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.3	3.3e-38	33	92	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++ l+cprCdstntkfCyynny+l+qPr+fCk+CrryWt+GG+lr+vPvGgg+rkn k+s Pav_sc0000890.1_g920.1.mk 33 TDPLHCPRCDSTNTKFCYYNNYNLAQPRHFCKSCRRYWTQGGTLRDVPVGGGSRKNSKRS 92 56789***************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MPFESEDNNQ KPPSTTTTTK VQQSMGHQPP PQTDPLHCPR CDSTNTKFCY YNNYNLAQPR 60 HFCKSCRRYW TQGGTLRDVP VGGGSRKNSK RSRSTTCSSS SCSPSSSSLT QEVTSVATAK 120 PVSLSAEVKP EPASDVDHLM DLNENVVGNG GFTSLLNSQG PPPPGFLALG GYGYGYGYGS 180 AFGHGLDEVG DAFGHGSKGV WAFPEVGDFP STVIDHNNNN GAPSGCNTWQ MTTGADGGFV 240 DGDCFAWPEL EISMMPASGK TFKCHRPGTT CCMVHCVVDN AES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50410.1	9e-35	Dof family protein