PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000886.1_g310.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 790aa MW: 89077 Da PI: 5.0416

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000886.1_g310.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.3	3.6e-08	683	727	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + WT+eE+++++d+vk + W++ +r + ++t+++++s+++++ Pav_sc0000886.1_g310.1.mk 683 LQWTAEEEKRFKDLVKSNSPSFWNRASRWFR-NKTRENLVSYYFNV 727 57***************************.*********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 790 aa Download sequence
MIKEIWLLII GLINELNLLD IRYPRSSDEH VPLSSRQGVT PAFSTGLLVD TNLDTSIPDT 60 YRPPPTPIPY DVAVVGHPQT PPAAQEICGN KSEGALLTTN SDSVHEAVGG NAQEASAKCE 120 DLKDSDCKAQ TDFELEAEKK SEVELSKSVE SVALVPEEED VCPTCLEEYD AQNPKITTKC 180 EHHFHLACIL EWMERSDTCP VCDQMLPRGA SEKSTSVKRN TGHMQNALAS NRMLMYVPDH 240 FHVVTPIPAV IDDRQPVDLF KLFCLVRDRG GYDWVSKNSL WSFVANELGL DGGATASVKL 300 IYFKYLNELE KWFRESCKSR SSGNGQSGLY GEFQLLSSEL GREFRDLLLD GPEQKGKGNG 360 PVQFESDENG KIEFNLSDTK DAYGMHVGAD QCREDDEEKV CNDDQNGVLI SLDSLNKKEN 420 DRKRKRESLS GMLNWVVQIA KQPNDPSIGV IPGPTNWKEH KGDECWFQVI RAREALLLRR 480 NVDSKTEESL LQKKLKTHPL LYEDNIVAGH QSSERLRCSE RFPNSVKSRS CPCCSSCSVP 540 QSNLISPRKK ELDNNSKEQA PVEVDLLATN TMVCPSVDAP HEKHVSIGTL FQADVPEWTG 600 VASESDIKWL GTRVWPLQCE EDSSLHETDL TGKGRPDMCG CRLPGSVVCI RFHIAEARMK 660 LKRELGSLFY RWRFDRMGEE VSLQWTAEEE KRFKDLVKSN SPSFWNRASR WFRNKTRENL 720 VSYYFNVFLV QSRSYQNRVT PKNIDSDDDE TEFGSFSNGF RHDAVEVSAN FVACSQNQQC 780 TDLDYIKNAV

Sequence ? help Back to Top

Protein Sequence Length: 790 aa Download sequence

MIKEIWLLII GLINELNLLD IRYPRSSDEH VPLSSRQGVT PAFSTGLLVD TNLDTSIPDT  60
YRPPPTPIPY DVAVVGHPQT PPAAQEICGN KSEGALLTTN SDSVHEAVGG NAQEASAKCE  120
DLKDSDCKAQ TDFELEAEKK SEVELSKSVE SVALVPEEED VCPTCLEEYD AQNPKITTKC  180
EHHFHLACIL EWMERSDTCP VCDQMLPRGA SEKSTSVKRN TGHMQNALAS NRMLMYVPDH  240
FHVVTPIPAV IDDRQPVDLF KLFCLVRDRG GYDWVSKNSL WSFVANELGL DGGATASVKL  300
IYFKYLNELE KWFRESCKSR SSGNGQSGLY GEFQLLSSEL GREFRDLLLD GPEQKGKGNG  360
PVQFESDENG KIEFNLSDTK DAYGMHVGAD QCREDDEEKV CNDDQNGVLI SLDSLNKKEN  420
DRKRKRESLS GMLNWVVQIA KQPNDPSIGV IPGPTNWKEH KGDECWFQVI RAREALLLRR  480
NVDSKTEESL LQKKLKTHPL LYEDNIVAGH QSSERLRCSE RFPNSVKSRS CPCCSSCSVP  540
QSNLISPRKK ELDNNSKEQA PVEVDLLATN TMVCPSVDAP HEKHVSIGTL FQADVPEWTG  600
VASESDIKWL GTRVWPLQCE EDSSLHETDL TGKGRPDMCG CRLPGSVVCI RFHIAEARMK  660
LKRELGSLFY RWRFDRMGEE VSLQWTAEEE KRFKDLVKSN SPSFWNRASR WFRNKTRENL  720
VSYYFNVFLV QSRSYQNRVT PKNIDSDDDE TEFGSFSNGF RHDAVEVSAN FVACSQNQQC  780
TDLDYIKNAV