PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000852.1_g750.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 259aa MW: 28766.6 Da PI: 8.6945

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000852.1_g750.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26	1.6e-08	167	207	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r RR+ri +++ L++l+P +K++ a++L +A++Y+k L Pav_sc0000852.1_g750.1.mk 167 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 207 699***************87.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence
MDIVQLKSEE QMEMMMMMQM EKISELCGAY NDVVSDLPPS DHTFSSTTTT TTSPNSITSN 60 TSMPHYTDQQ NPQNIPSPNS QSFLNLPTIP TIPSTISFSN TTNPTDQTSN FSNGFLPSSQ 120 KRTSMAAMRE MIFRIAAMQP IHIDPESVKP PKRRNVKISK DPQSVAARHR RERISERIRI 180 LQRLVPGGTK MDTASMLDEA IHYVKFLKSQ VQTLERAAAN RPTGIGFPVA MSSGSYGLHS 240 VAKAYQASCH ENVQHFGDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67060.1	1e-42	bHLH family protein