PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000852.1_g590.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 308aa    MW: 34916.3 Da    PI: 8.103
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000852.1_g590.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM86.36e-27121411127
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkklel..eevikevdiykvePwdLp.k...kvkaeekewyfFskrdkkyatgkrknrat 78 
                                lppG+rF P++e+l+++yL +k ++++ +    + i+e+d+y+++P dLp +   ++ +  ++ ++F+ + +       k+r +
  Pav_sc0000852.1_g590.1.mk  12 LPPGCRFYPSEEQLLCCYLSNKNDADPAQSggYDLIRELDLYDHDPFDLPdSacySYGHAGRKRHWFCYTVRVL-----KERRA 90 
                                79**********************99966522567**************9535552222334555555555543.....34556 PP

                        NAM  79 ksgyWkatgkdkevlsk.kgelvglkktLvfykgrapk.gektdWvmheyr 127
                                ksgyW+ +g+d++v+ + ++++ g ++++vfy g++p+ +++tdWv+ +y+
  Pav_sc0000852.1_g590.1.mk  91 KSGYWRRKGRDRDVVGRgGKAVLGRRTSFVFYLGNSPNtAVRTDWVLYQYA 141
                                99**************9556678*********997665167*********6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MGDPKATSLR SLPPGCRFYP SEEQLLCCYL SNKNDADPAQ SGGYDLIREL DLYDHDPFDL  60
PDSACYSYGH AGRKRHWFCY TVRVLKERRA KSGYWRRKGR DRDVVGRGGK AVLGRRTSFV  120
FYLGNSPNTA VRTDWVLYQY AQVDHVMASF VLCRVFVRSR GNRLSYNGVS SCAEESACTV  180
RHIGIQHDGF HTPNIVETEV HGDNSAHRKN EMLNFPMRLD CEINDRVKNG PVSISRLQPN  240
VRVCRQKYPH DSKQMKTAST YGWSLNNLKT VPSSVLGGSN PIFLDDLATE HLLSIVEGDF  300
IELDDLND
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-20NAC family protein