PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000852.1_g1140.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 857aa    MW: 95587.5 Da    PI: 9.6791
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000852.1_g1140.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.11e-15419504192
                                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
                          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 
                                 f+k +++s+v+   +l lp +f++++  k  ++  ++l de+g +++  +    ++++  l++GW++F+ a++L +gD +vF+
  Pav_sc0000852.1_g1140.1.mk 419 FVKPMLQSHVTGGFWLGLPIHFCNKNLPK--RDESVILVDEDGDEYQTVY--LANKRG--LSGGWRGFAIAHELVDGDALVFQ 495
                                 89*********************999433..4557***************..555555..9********************** PP

                                 E-SSSEE.. CS
                          B3  84 ldgrsefel 92 
                                 l++ ++f++
  Pav_sc0000852.1_g1140.1.mk 496 LIRPKTFKM 504
                                 *99888865 PP
2B350.34.2e-16587673195
                                 EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEE CS
                          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvv 81 
                                 f+k+++ps+v+   +l l  +f++eh  +    ++  +tl de+g ++   +  rk++    l++GWk+F+ a++L +gD +v
  Pav_sc0000852.1_g1140.1.mk 587 FVKTMLPSHVSGGFWLGLQVQFCKEHlpK----GDEVMTLIDEDGDEYPTIYLARKTG----LSGGWKGFAVAHDLVDGDALV 661
                                 89************************543....4458***************656665....********************* PP

                                 EEE-SSSEE..EEE CS
                          B3  82 Fkldgrsefelvvk 95 
                                 F+l++r++f  +v 
  Pav_sc0000852.1_g1140.1.mk 662 FQLIRRTSF--KVE 673
                                 ****99999..555 PP
3B3444e-14759847298
                                 EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS
                          B3   2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82 
                                 +k+ +ps+ +    l+l ++f+ e+  +    ++  +tl d +g+++  ++      +r+ l++GWkeF+ a+ L egD +vF
  Pav_sc0000852.1_g1140.1.mk 759 VKTIIPSYISGGFFLCLKRQFCMENlpK----GDEVMTLVDVDGNEYPTRY----LAQRFGLSAGWKEFAFAHALVEGDALVF 833
                                 68999*****************999543....44589**************....455689********************** PP

                                 EE-SSSEE..EEEEE- CS
                          B3  83 kldgrsefelvvkvfr 98 
                                 +l++ + f  +v ++r
  Pav_sc0000852.1_g1140.1.mk 834 QLIRPTAF--KVYIVR 847
                                 ***97888..887776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 857 aa     Download sequence    
MKILLTGASG YLGGRLCHEL LKQGHSVRAL VRPTSDLSSL PPPSPTGNGG LELVYGDVTD  60
YNSLLSAFSG CDVVFHAAAV VEPWLPDPSK FFSVNVGGLK NVLRAVRETK TVQKVIYTSS  120
FFALGPTDGH VANEAQVHHE KFFCTEYEKS NAAADKIALQ AAQQEELPLV LLYPGVIYGP  180
GKLTAGNVVA RMIVERFNGR LPGYIGSGND RYSFSHVDDV VEGHIRAMEK GRTGERYLLT  240
GENASFKHVF DVAAVITKTQ RPKFGIPLWL IEVYGWASVL FSRITGKLPL ISPPTVYVLR  300
HQWAYSCEKA KQELDYSPRG LKEGLGEMKR AKPRTVEKQM VVVRRSSRVA NLPTPVYKEV  360
GSFIFHLIAV DPLRMPRRHS TSKHRDLSNR VYASDEARAE ATERAEELES GLGSDHPTFV  420
KPMLQSHVTG GFWLGLPIHF CNKNLPKRDE SVILVDEDGD EYQTVYLANK RGLSGGWRGF  480
AIAHELVDGD ALVFQLIRPK TFKMKRTKPR TVEKQMVVVR RSSRVANLPT PVYKEVVVDR  540
VMIPRKSYSS RHRDFSNRVY ASDEARAEAM ERAANLESGL GSDHPIFVKT MLPSHVSGGF  600
WLGLQVQFCK EHLPKGDEVM TLIDEDGDEY PTIYLARKTG LSGGWKGFAV AHDLVDGDAL  660
VFQLIRRTSF KVELARPRTF EKHLVQVRRS TRVSNHSSPV YKEVFVERVR MPRMSYHSSW  720
QKGLWNRTNA SASGEARAAA LHEAQKLESG LGSDNPTIVK TIIPSYISGG FFLCLKRQFC  780
MENLPKGDEV MTLVDVDGNE YPTRYLAQRF GLSAGWKEFA FAHALVEGDA LVFQLIRPTA  840
FKVYIVRAKR SEGSSAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.15e-49B3 family protein