PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000843.1_g680.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 491aa MW: 53740 Da PI: 5.8504

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000843.1_g680.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.2	7.9e-33	255	309	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +pr+rWtpeLHe+Fveav++L G+ekAtPk +l++m+v+gLt++hvkSHLQkYRl Pav_sc0000843.1_g680.1.mk 255 RPRMRWTPELHECFVEAVNKLDGAEKATPKGVLKVMNVEGLTIYHVKSHLQKYRL 309 59****************************************************8 PP
2	Myb_DNA-binding	51.3	2.7e-16	257	308	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++l g t+k + + m+ +g+t +++ks++qky+ Pav_sc0000843.1_g680.1.mk 257 RMRWTPELHECFVEAVNKLDGAekaTPKGVLKVMNvEGLTIYHVKSHLQKYR 308 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MKVGLPSTIM SHHDIISVPQ SETSKGVKQS YCTPKSQMHD FLGSESEGRS LVASECSSAR 60 LSPFIRAESL GSPTKIRGSS VQHSQNTFSR SSVFCTSLYQ SSSSTSETSR QLGNLPFLPH 120 PPTYSQSISA VASKSPFLLS DDMSNQYDDE QSEDLMKDFL NLHGDGSHGS FHVISCGSDT 180 LALTEQLELQ FLSDQLDMAI TDNGENPGLD EIYEIPQVSP KPAIGLTCSK SCRLTTPPVD 240 ALSSHTSPGP SPAHRPRMRW TPELHECFVE AVNKLDGAEK ATPKGVLKVM NVEGLTIYHV 300 KSHLQKYRLA KYVPEKREVE WSDKLLTCTY PVLSLDKKAS SSEEKKAASS SGESDGQRKG 360 SIQITEALRM QMEVQKQLHE QLEVQRALQL RIEDHAKYLQ KILEEQQKAG SALLSPQALS 420 SLTTNSIQEP EQQPSSSAGV SPTQPAESDS SSPLSLKHKA TDSSDSEPPA CTKKQRLEEK 480 PDEGVVENPQ Q

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MKVGLPSTIM SHHDIISVPQ SETSKGVKQS YCTPKSQMHD FLGSESEGRS LVASECSSAR  60
LSPFIRAESL GSPTKIRGSS VQHSQNTFSR SSVFCTSLYQ SSSSTSETSR QLGNLPFLPH  120
PPTYSQSISA VASKSPFLLS DDMSNQYDDE QSEDLMKDFL NLHGDGSHGS FHVISCGSDT  180
LALTEQLELQ FLSDQLDMAI TDNGENPGLD EIYEIPQVSP KPAIGLTCSK SCRLTTPPVD  240
ALSSHTSPGP SPAHRPRMRW TPELHECFVE AVNKLDGAEK ATPKGVLKVM NVEGLTIYHV  300
KSHLQKYRLA KYVPEKREVE WSDKLLTCTY PVLSLDKKAS SSEEKKAASS SGESDGQRKG  360
SIQITEALRM QMEVQKQLHE QLEVQRALQL RIEDHAKYLQ KILEEQQKAG SALLSPQALS  420
SLTTNSIQEP EQQPSSSAGV SPTQPAESDS SSPLSLKHKA TDSSDSEPPA CTKKQRLEEK  480
PDEGVVENPQ Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13040.1	1e-114	G2-like family protein