PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000843.1_g580.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HB-other

Protein Properties

Length: 1140aa MW: 128901 Da PI: 7.729

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000843.1_g580.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	36.1	1.1e-11	8	58	7	57
--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 t++qle+Le+++ ++ryps++++e A+ +Lt +qV+ WF +R +ek+ Pav_sc0000843.1_g580.1.mk 8 KTQSQLEALESFYSEDRYPSRTAMECHAAAFRLTYKQVRGWFVEKRRREKR 58 699**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1140 aa Download sequence
MMEKIKRKTQ SQLEALESFY SEDRYPSRTA MECHAAAFRL TYKQVRGWFV EKRRREKREN 60 KTTEELGGRN GSGAGAPRVV KHCLSKAKAP SLSRYKQTKM NGNHIQELLT PDYILKKVFR 120 KDGPPLGVEF DSLPSRALFH STDPEDLHPP CKENQRETKR RKVTEHAVIG HQNCDKSAPV 180 KKHGVGKGLM TVWRATNPDA RDFPVDMGFA NGEVTSVSLN PTSVSRKPVT RNRRLQQKKC 240 VPKQGRVRNK VQEKRKHFVK RREVESNNEN QTLPSKEKCE LALEGAGSQE HSDKIAMLVE 300 DEELELRQLQ GRPNALGCSD HFTTNGDHAC SLCKDFLAKF PPNSVKMKQP FCMQPWDSSP 360 EIVKKLFKVF HFLCTYAVMV DISSFTIDEF AQAFQDKDSL LLGKIHVALL KLLLSNVEAE 420 LRCGSIPHLS KSCNFLAFIH SVENQESTLE FWKRSLNPLT WTEILRQVLV AAGFGSKQGA 480 MRRDALSKEM SLMVKYGLRP GTLKGELFRV LLEQGIHGLK VSELAKSLQI SELNLSSGIE 540 ELESLIGSTL SSDITLFEKI SSSTYRVRIN SSEKEVEESQ SDTEDSGAVD DDLSDSGTCS 600 SDDDSGCNSG NSQIKKLTYM NHGKSKDNMV TVYTEIDESH PGEVWLLGLM EGEYSDLSIE 660 EKLSAIVALI DLLHAGSSFR MEDPINAIAE CIPSSLHSGS GAKIKRLSTK QHRMPRPTWV 720 HAGHTSGAKE DYTLKFHPID SSGSISKFSD ERFSTKEKNG KEREVRFDLH PMQSVFLGSD 780 RRYNRYWLFL GPCNAYDPGH RRVYFESSED GHWEVIDTEE ALCALLSVLD DRGKREALLI 840 ESLEKRIAFL CQAMSSRMVN SDRIDNLAQS DQSELDSVRE DTYSPVSDVD NNLSGIANDS 900 LPSSGVVVLE VRKKGEQQKQ KWSRIQAFDS WLWNSFYLDL NAVKHGKRSY FDTLTRCESC 960 HDLYWRDEKH CRICHTTFEL HFDLEERYAI HVATCKEKEA SDTFPKHKVL SSQIQSLKAA 1020 MHAIESVMPE DALLGAWKKS AHKLWVKRLR RTSSLAELLQ VLGDFVGAIN EDRLYECNIV 1080 QGSCNFSEEL IASFACMPQT TSAVALWLVR LDALIAPYLE RAHSQKRLEI SVRGKHAPKQ

Sequence ? help Back to Top

Protein Sequence Length: 1140 aa Download sequence

MMEKIKRKTQ SQLEALESFY SEDRYPSRTA MECHAAAFRL TYKQVRGWFV EKRRREKREN  60
KTTEELGGRN GSGAGAPRVV KHCLSKAKAP SLSRYKQTKM NGNHIQELLT PDYILKKVFR  120
KDGPPLGVEF DSLPSRALFH STDPEDLHPP CKENQRETKR RKVTEHAVIG HQNCDKSAPV  180
KKHGVGKGLM TVWRATNPDA RDFPVDMGFA NGEVTSVSLN PTSVSRKPVT RNRRLQQKKC  240
VPKQGRVRNK VQEKRKHFVK RREVESNNEN QTLPSKEKCE LALEGAGSQE HSDKIAMLVE  300
DEELELRQLQ GRPNALGCSD HFTTNGDHAC SLCKDFLAKF PPNSVKMKQP FCMQPWDSSP  360
EIVKKLFKVF HFLCTYAVMV DISSFTIDEF AQAFQDKDSL LLGKIHVALL KLLLSNVEAE  420
LRCGSIPHLS KSCNFLAFIH SVENQESTLE FWKRSLNPLT WTEILRQVLV AAGFGSKQGA  480
MRRDALSKEM SLMVKYGLRP GTLKGELFRV LLEQGIHGLK VSELAKSLQI SELNLSSGIE  540
ELESLIGSTL SSDITLFEKI SSSTYRVRIN SSEKEVEESQ SDTEDSGAVD DDLSDSGTCS  600
SDDDSGCNSG NSQIKKLTYM NHGKSKDNMV TVYTEIDESH PGEVWLLGLM EGEYSDLSIE  660
EKLSAIVALI DLLHAGSSFR MEDPINAIAE CIPSSLHSGS GAKIKRLSTK QHRMPRPTWV  720
HAGHTSGAKE DYTLKFHPID SSGSISKFSD ERFSTKEKNG KEREVRFDLH PMQSVFLGSD  780
RRYNRYWLFL GPCNAYDPGH RRVYFESSED GHWEVIDTEE ALCALLSVLD DRGKREALLI  840
ESLEKRIAFL CQAMSSRMVN SDRIDNLAQS DQSELDSVRE DTYSPVSDVD NNLSGIANDS  900
LPSSGVVVLE VRKKGEQQKQ KWSRIQAFDS WLWNSFYLDL NAVKHGKRSY FDTLTRCESC  960
HDLYWRDEKH CRICHTTFEL HFDLEERYAI HVATCKEKEA SDTFPKHKVL SSQIQSLKAA  1020
MHAIESVMPE DALLGAWKKS AHKLWVKRLR RTSSLAELLQ VLGDFVGAIN EDRLYECNIV  1080
QGSCNFSEEL IASFACMPQT TSAVALWLVR LDALIAPYLE RAHSQKRLEI SVRGKHAPKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	0.0	HB-other family protein