PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000766.1_g120.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 170aa MW: 19837.1 Da PI: 10.1987 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.6 | 2.1e-52 | 1 | 131 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyatgkrknratksg 81 + pGfrFhPtdeelv +yL++k++++ l++ e ik+vdiyk++PwdLp k ++++ekewyf+++rd+ky+++ r+nr+t +g Pav_sc0000766.1_g120.1.mk 1 MLPGFRFHPTDEELVGFYLRRKIQQRLLPI-ELIKQVDIYKYDPWDLPsKaeLASTGEKEWYFYCPRDRKYRNSARPNRVTGAG 83 579***************************.89**************953544455889************************* PP NAM 82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +Wkatg+d++++s+ +++ +glkk+Lvfy+gra kg ktdW+mhe+rl Pav_sc0000766.1_g120.1.mk 84 FWKATGTDRPIYSSeGSKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRL 131 *************956677***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
MLPGFRFHPT DEELVGFYLR RKIQQRLLPI ELIKQVDIYK YDPWDLPSKA ELASTGEKEW 60 YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSEGS KCIGLKKSLV FYRGRAAKGI 120 KTDWMMHEFR LPSLSESAPP PKKLLDKSLP ANVSLRYFFP LFVFQLCFGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39820.1 | 8e-84 | NAC family protein |