PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000762.1_g070.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 611aa MW: 65778.6 Da PI: 6.0819

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000762.1_g070.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	90.5	2.8e-28	28	114	1	86
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgy 82 l+pGfrFhPtdeelv +yLk+kv +k++++ ++i+evdiyk+ePwdL k ++k++++e+yfFs d+ky +g r nrat++g+ Pav_sc0000762.1_g070.1.mk 28 LAPGFRFHPTDEELVIYYLKRKVCRKPFKF-NAISEVDIYKSEPWDLAdKsSLKSRDQEYYFFSALDRKYGNGARMNRATNQGV 110 579************************9.89**********75347888999***********************9 PP NAM 83 Wkat 86 +++ Pav_sc0000762.1_g070.1.mk 111 FHKS 114 8875 PP

Sequence ? help Back to Top
Protein Sequence Length: 611 aa Download sequence
MGREAEQPKA IVLAATAPAT PPPAPTALAP GFRFHPTDEE LVIYYLKRKV CRKPFKFNAI 60 SEVDIYKSEP WDLADKSSLK SRDQEYYFFS ALDRKYGNGA RMNRATNQGV FHKSNIGPPN 120 GHRYAPFVEE EWDDDDKLTL VPGQESRNEA VAGRDAFIIG NGHAACSEQN AHAACSEQNA 180 HAARSEQKAH AARSEQSGHA ARREQNGHAA CIEGNDHAAC NGENGHGTSV QGNGHGTSVQ 240 GNGHDTSVQE NGHGTSVQGN GHGTSVKGNG HGTSVEGNGH GTSVQENGHG TSVKGNGHGT 300 SVEGNGHGTS VKGNGHGTSV KENGHGTSVK ENGHGTSVKE NGHGTSVKGN GHVTSVEGNG 360 HGTIIEGGDH GTTNEGNCLE MVEYGPDLHN AGNNFEQDTQ PISNALVTDA ELPTENENDL 420 PLCKTERMDD YPMTCVVNRE ERLDDYPSPG PDDAQPLLSL FHRHPGQLRQ YKRRRHNDSN 480 SNHSNASDIS SGMTHDPCSS TTTTASTEAS MTTTTRNFLS ALVEYQLLES LEPKDTTPPP 540 PPEFSAALLH SSVPPSCLKY VETLQNEIHK ISIERETLKF EMMSAQAMIN ILQARIDLLN 600 KENEDLKRNN V

Sequence ? help Back to Top

Protein Sequence Length: 611 aa Download sequence

MGREAEQPKA IVLAATAPAT PPPAPTALAP GFRFHPTDEE LVIYYLKRKV CRKPFKFNAI  60
SEVDIYKSEP WDLADKSSLK SRDQEYYFFS ALDRKYGNGA RMNRATNQGV FHKSNIGPPN  120
GHRYAPFVEE EWDDDDKLTL VPGQESRNEA VAGRDAFIIG NGHAACSEQN AHAACSEQNA  180
HAARSEQKAH AARSEQSGHA ARREQNGHAA CIEGNDHAAC NGENGHGTSV QGNGHGTSVQ  240
GNGHDTSVQE NGHGTSVQGN GHGTSVKGNG HGTSVEGNGH GTSVQENGHG TSVKGNGHGT  300
SVEGNGHGTS VKGNGHGTSV KENGHGTSVK ENGHGTSVKE NGHGTSVKGN GHVTSVEGNG  360
HGTIIEGGDH GTTNEGNCLE MVEYGPDLHN AGNNFEQDTQ PISNALVTDA ELPTENENDL  420
PLCKTERMDD YPMTCVVNRE ERLDDYPSPG PDDAQPLLSL FHRHPGQLRQ YKRRRHNDSN  480
SNHSNASDIS SGMTHDPCSS TTTTASTEAS MTTTTRNFLS ALVEYQLLES LEPKDTTPPP  540
PPEFSAALLH SSVPPSCLKY VETLQNEIHK ISIERETLKF EMMSAQAMIN ILQARIDLLN  600
KENEDLKRNN V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10490.1	1e-38	NAC family protein