PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000755.1_g370.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 364aa    MW: 39926.6 Da    PI: 5.5275
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000755.1_g370.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.19.2e-185199355
                        AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                               + GVr+++ +gr++AeIrdps+   + r++lg+f+ta+eAa a+++a+++++g
  Pav_sc0000755.1_g370.1.mk 51 FLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAQEAALAYDRAALSMKG 99
                               56******.**********965...5************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MSTSKTSDKP FKAYEQGQAQ MGFASVLQRN TPPSQSGERR GRRKQAEPGR FLGVRRRPWG  60
RYAAEIRDPS TKERHWLGTF DTAQEAALAY DRAALSMKGS QARTNFIYSD NTTFHSLLTP  120
FDLQTLSPQQ SQFFSAAKQQ PTNHNSPPHQ SGIFQNDQTQ NPNIRSNNIN TCGAETSHGS  180
SSHDGDDDGF FFSNGSNSNS GYLACIVPDN CLRPPSESDH HATNHRSSKT SDFNIDQDCS  240
FANTNSIETK SHCLDVMNVQ AALMASSTNP PGDQLPSFDE FSQGFWDNQQ PIWELHSREL  300
SAAMVDNPFM IEDGCMGGGA LYPIVENSSF GLIPQATTSS SSCSCSPSVP PFGDAVFDFG  360
QSLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.14e-51ERF family protein