PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000755.1_g310.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 581aa MW: 63724.7 Da PI: 10.3307

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000755.1_g310.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.3	9.5e-10	107	142	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 WT+eE e +++a +++G++ Wk++a+ + +R+ +++ Pav_sc0000755.1_g310.1.mk 107 QWTKEELENFYEAYRKYGKD-WKKVASVVR-HRSVEMV 142 6***************99.******9.9998776 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
FRGCPRPISH SSSSTSSSSS FFSTTATSSQ FQCCSNALSL HRSEPGRALI GVQTLLQRKL 60 AMAPSRISRS INKRFSYMNE AASNKYGENA NKTGQKKRKL SAMLGPQWTK EELENFYEAY 120 RKYGKDWKKV ASVVRHRSVE MVEALYSMNK AYLSLPEGVA SVVGLIAMMT DHYCILGGSD 180 SEQENNDDAE TSRKPQKHAR SKLRSESSKE LEGHIPDFSE SHPMASTSDC LSPLKNRRSG 240 IRPHAVKKRT PRVPVAYSND QDNSRKYSPP ARQGLKLNVD ANNNDVAHEI ALALTEASHR 300 GGSPLVSWTP KRKAKGTTPS PVRNGERMRA ESEMTNARLH GCEMDVGGCE LSLGSTEADN 360 DYYDRNEKYA MGREGTGTLE VQQRRKRYFV KKKEVDESKN EHVEFIKEAC SGTEEGHKLG 420 AIKRKLDTKV AKSARSFYKD TRKKSKKALV GGVVQMSNLI RSRKAVTTAQ SSPPPAQPSA 480 ANAPAQMDHL PVGPGVSHEP ASSASSVAQP VSVRRRHRPP STTDTTSTSA TGASQSNSQV 540 IALTAKVAKL ETQLASFSTQ MSQFLESLTR SGIPISHFGP L

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

FRGCPRPISH SSSSTSSSSS FFSTTATSSQ FQCCSNALSL HRSEPGRALI GVQTLLQRKL  60
AMAPSRISRS INKRFSYMNE AASNKYGENA NKTGQKKRKL SAMLGPQWTK EELENFYEAY  120
RKYGKDWKKV ASVVRHRSVE MVEALYSMNK AYLSLPEGVA SVVGLIAMMT DHYCILGGSD  180
SEQENNDDAE TSRKPQKHAR SKLRSESSKE LEGHIPDFSE SHPMASTSDC LSPLKNRRSG  240
IRPHAVKKRT PRVPVAYSND QDNSRKYSPP ARQGLKLNVD ANNNDVAHEI ALALTEASHR  300
GGSPLVSWTP KRKAKGTTPS PVRNGERMRA ESEMTNARLH GCEMDVGGCE LSLGSTEADN  360
DYYDRNEKYA MGREGTGTLE VQQRRKRYFV KKKEVDESKN EHVEFIKEAC SGTEEGHKLG  420
AIKRKLDTKV AKSARSFYKD TRKKSKKALV GGVVQMSNLI RSRKAVTTAQ SSPPPAQPSA  480
ANAPAQMDHL PVGPGVSHEP ASSASSVAQP VSVRRRHRPP STTDTTSTSA TGASQSNSQV  540
IALTAKVAKL ETQLASFSTQ MSQFLESLTR SGIPISHFGP L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	4e-97	MYB_related family protein