PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000755.1_g250.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 1166aa MW: 130009 Da PI: 9.0425

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000755.1_g250.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.2	2.2e-09	46	81	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 WT+eE e +++a +++G++ Wk++a+ + +R+ +++ Pav_sc0000755.1_g250.1.mk 46 QWTKEELENFYEAYRKYGKD-WKKVASVVR-HRSVEMV 81 6***************99.******9.9998766 PP

Sequence ? help Back to Top
Protein Sequence Length: 1166 aa Download sequence
MAPSRKSRSV NKRFSYMNEA ASNKYGENAN KTGQKKRKLS AMLGPQWTKE ELENFYEAYR 60 KYGKDWKKVA SVVRHRSVEM VEALYSMNKA YLSLPEGVAS VVGLIAMMTD HYCILGGSDS 120 EQENNEDAET SRKPQKHARS KLRSESSKGL EGHIPDFSQS HPMASTSDCL SLLKNRRSGI 180 RPHAVKKRTP RVPVAYSNDQ DNSRKYSSPA RQGLKLNADA NNNDVAHEIA LALTEASHRG 240 GSPLVSWTPK RKAKGTTPSP VRNGERMRAE SEMTNARLHG CEMDEGGCEL SLGSTEADND 300 YYDRNEKYAM GREGTGTVEV QQRRKRYFVK KNEVDESKNE HVEDIKEACS GTEEGEKLGA 360 IKGKLDTKVA KSARSFYKDT RKKSKKALVG GDEGSPFDAL QTLADLSLMM PEAADTESSA 420 HVKEDNFNIA NKSKLKGSHP IPGVEHAAFK TSKLGKLGEG VHQSNSGLQK GKQKSLSFKI 480 YNEAQTDCYG SDNEKIEATV EVKKSASKGK RSSHYTTHPK QGKLVKKTLW NASSTTDRKR 540 EENNSGLSTV QVPSANPANL PTKNKGKWEM DMQKSSIQKD TKSPESILDD QPDKLVPSVH 600 NRELNIKEKL SNCLSRYQVR RWCAFEWFYS AIDYPWFAKR EFVEYLDHVG LGHVPRLTRV 660 EWGVIRSSLG RPRRFSEQFL KEEKEKLNQY RESVRTHYAE LNAGTREGLP TDLARPLSVG 720 QHVIAFHPRA REIHNGIVLT VDHSRCSVQF DQPELGVEYI MDVDCMPIHP AENLPASFRK 780 HNVTVNKYIE NLKELKINEQ LKEGKTKGYM KISSSDKLVS TGVPGYILPS NLCINKSSKQ 840 TGVKSSSFNV QAKVGPGETA STQVANYRPS IPSQTQAKEA DVQAIYELTR ALDKKEAVVS 900 ELRRMNDEVF ENQRDEDNSI RDSEPFKKEY AAVLLQLSQV NDQVSSALLC LRQRNTYRGS 960 SPHTVVKPMD NLSGPGSHSN SYGYSCDFQE SASHMHEIVE SSRAKAHKMV DAAMQAFSSL 1020 RKENNFDKIE EVIDFVSNRL SDDAGMLAMG SSTTPADPIP VSQDQLTSCT SKPLATGCAH 1080 DPSKSNNLSN QSEEKLLSDL IVNCVAAFMM IQTCTARQFP PADVAQVLDH AVTSLQPFCP 1140 QNLSVYGEIQ KCMGIIRNQI MALVPT

Sequence ? help Back to Top

Protein Sequence Length: 1166 aa Download sequence

MAPSRKSRSV NKRFSYMNEA ASNKYGENAN KTGQKKRKLS AMLGPQWTKE ELENFYEAYR  60
KYGKDWKKVA SVVRHRSVEM VEALYSMNKA YLSLPEGVAS VVGLIAMMTD HYCILGGSDS  120
EQENNEDAET SRKPQKHARS KLRSESSKGL EGHIPDFSQS HPMASTSDCL SLLKNRRSGI  180
RPHAVKKRTP RVPVAYSNDQ DNSRKYSSPA RQGLKLNADA NNNDVAHEIA LALTEASHRG  240
GSPLVSWTPK RKAKGTTPSP VRNGERMRAE SEMTNARLHG CEMDEGGCEL SLGSTEADND  300
YYDRNEKYAM GREGTGTVEV QQRRKRYFVK KNEVDESKNE HVEDIKEACS GTEEGEKLGA  360
IKGKLDTKVA KSARSFYKDT RKKSKKALVG GDEGSPFDAL QTLADLSLMM PEAADTESSA  420
HVKEDNFNIA NKSKLKGSHP IPGVEHAAFK TSKLGKLGEG VHQSNSGLQK GKQKSLSFKI  480
YNEAQTDCYG SDNEKIEATV EVKKSASKGK RSSHYTTHPK QGKLVKKTLW NASSTTDRKR  540
EENNSGLSTV QVPSANPANL PTKNKGKWEM DMQKSSIQKD TKSPESILDD QPDKLVPSVH  600
NRELNIKEKL SNCLSRYQVR RWCAFEWFYS AIDYPWFAKR EFVEYLDHVG LGHVPRLTRV  660
EWGVIRSSLG RPRRFSEQFL KEEKEKLNQY RESVRTHYAE LNAGTREGLP TDLARPLSVG  720
QHVIAFHPRA REIHNGIVLT VDHSRCSVQF DQPELGVEYI MDVDCMPIHP AENLPASFRK  780
HNVTVNKYIE NLKELKINEQ LKEGKTKGYM KISSSDKLVS TGVPGYILPS NLCINKSSKQ  840
TGVKSSSFNV QAKVGPGETA STQVANYRPS IPSQTQAKEA DVQAIYELTR ALDKKEAVVS  900
ELRRMNDEVF ENQRDEDNSI RDSEPFKKEY AAVLLQLSQV NDQVSSALLC LRQRNTYRGS  960
SPHTVVKPMD NLSGPGSHSN SYGYSCDFQE SASHMHEIVE SSRAKAHKMV DAAMQAFSSL  1020
RKENNFDKIE EVIDFVSNRL SDDAGMLAMG SSTTPADPIP VSQDQLTSCT SKPLATGCAH  1080
DPSKSNNLSN QSEEKLLSDL IVNCVAAFMM IQTCTARQFP PADVAQVLDH AVTSLQPFCP  1140
QNLSVYGEIQ KCMGIIRNQI MALVPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein