PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000751.1_g080.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GeBP

Protein Properties

Length: 343aa MW: 38281.8 Da PI: 4.8442

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000751.1_g080.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	106.1	2.6e-33	166	257	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdq 86 qr+ws++Dei +L G+id+ +k+g++p +d+ af++f+kks++++v+k+ql +KirrLKkK++++v+k gk+ + k+h+ Pav_sc0000751.1_g080.1.mk 166 LQRIWSDDDEIKILEGMIDYYTKQGVHPNADMFAFHDFMKKSLKADVNKTQLQDKIRRLKKKYETNVDK---GKKYNPVKPHEL 246 69*****************************************************************...999999** PP DUF573 87 kifelskkiWg 97 k+f+lskk+Wg Pav_sc0000751.1_g080.1.mk 247 KVFNLSKKVWG 257 ********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MAPNRPSSQD EPPEEVEASS EEEVDGEEEE ESGSEPESEP EPPTAPTPVA EKKPPPKNPD 60 LATVPQSSSP GSEEEEEESG SESEEPEPAL AEKKPDSAME ETPKTKKPRS KASATTTPAA 120 RAGSKRPSES DPTDSKRPKK KKISDSDQKP DHAGAGGDDS KKLLLLQRIW SDDDEIKILE 180 GMIDYYTKQG VHPNADMFAF HDFMKKSLKA DVNKTQLQDK IRRLKKKYET NVDKGKKYNP 240 VKPHELKVFN LSKKVWGRGE GSFAVGGLSE EYKCNETCEG LREQRLLEGC LELIGEPKRT 300 ELNEEWKKLN VTELELLVRK SELMRDKAKL MSDKAKLILE ALK

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MAPNRPSSQD EPPEEVEASS EEEVDGEEEE ESGSEPESEP EPPTAPTPVA EKKPPPKNPD  60
LATVPQSSSP GSEEEEEESG SESEEPEPAL AEKKPDSAME ETPKTKKPRS KASATTTPAA  120
RAGSKRPSES DPTDSKRPKK KKISDSDQKP DHAGAGGDDS KKLLLLQRIW SDDDEIKILE  180
GMIDYYTKQG VHPNADMFAF HDFMKKSLKA DVNKTQLQDK IRRLKKKYET NVDKGKKYNP  240
VKPHELKVFN LSKKVWGRGE GSFAVGGLSE EYKCNETCEG LREQRLLEGC LELIGEPKRT  300
ELNEEWKKLN VTELELLVRK SELMRDKAKL MSDKAKLILE ALK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	1e-28	GeBP family protein