PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000740.1_g160.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 411aa    MW: 45640.4 Da    PI: 9.8406
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000740.1_g160.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.34.2e-09166206345
                                SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
            Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                                 WT+ E +ll++ v ++G + W+++a+ ++ ++t  +c+ ++ 
  Pav_sc0000740.1_g160.1.mk 166 EWTESETLLLLESVLKHGDD-WELVAQNVQ-TKTKFDCIAKLI 206
                                7*****************88.*********.*******98875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    
MAPKRGVKPA AAAKKKTEKV VNPLFEKRTK QFGIGGALPP KRDLHRFVKW PKVVRIQRKK  60
RILKQRLKVP PALNQFTKTL DKNLGMDQTT MLVSARILHK KTAAALCLTT VKNEDKLEFS  120
KILEAIKGDF LICIKCFENG NYGENKLRDD FKLNEAIEKS GTNGVEWTES ETLLLLESVL  180
KHGDDWELVA QNVQTKTKFD CIAKLIDLPF GELVLGSAYR KGNPSGFSGN LISSEHIQLS  240
SSECQETVKT KGQLHEQTDD SKQNGDILDQ GPPLKRQRIA SLSDASSSLI KQVAAITTMV  300
GPHITSAAAE AAVNALCEET SCSREIFNAD DDSIPNGLWS PAKNCETERA TVKNEDKLEF  360
SKILEAIKAN FNDKYDEYRK KWGGGIMGSK SQARTKAKEK LLAKEAAQRL N