PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000732.1_g150.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 259aa MW: 29846.1 Da PI: 9.4924 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 63.6 | 5.5e-20 | 31 | 119 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 +fYn YA ++ F +r s++++ + +ge+t++++vC k+g++ +++ + ++rr+r trtgCkakl + k + ++k+ v +++ Pav_sc0000732.1_g150.1.br 31 NFYNMYAAKARFGIRCSTTRTCTFTGEVTRKKYVCCKQGYALTSTVS--RNRRQRGCTRTGCKAKLAILKVNeKNKYTVVGFNE 112 6*****************************************99888..9*****************988877*********** PP FAR1 84 eHnHela 90 HnH+++ Pav_sc0000732.1_g150.1.br 113 VHNHDMT 119 ****986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MECEGQVTPE VSSELKPKLG LEFDCCEDVF NFYNMYAAKA RFGIRCSTTR TCTFTGEVTR 60 KKYVCCKQGY ALTSTVSRNR RQRGCTRTGC KAKLAILKVN EKNKYTVVGF NEVHNHDMTT 120 VDKVHILRSH RNLTESTKAY SAHMSKVNIP VHKQVSLLEV QVGGLENVGF VRRDVYNYAR 180 DVRGEVIGHD AELLKEHFLA EQGKNESFYF NMEVDSEGRI GNVFWADARS RRAYGFFGVW 240 WYLIRRSTRT AMKWSLRLC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 5e-35 | FAR1 family protein |