PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000704.1_g100.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GRAS | ||||||||
Protein Properties | Length: 142aa MW: 16061.4 Da PI: 9.2993 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 35.9 | 1e-11 | 1 | 36 | 339 | 374 |
GRAS 339 lllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 +ll ++ +gyrvee++g+l+lgW++rpL+++SaW+ Pav_sc0000704.1_g100.1.mk 1 MLLTLFSAEGYRVEENDGCLTLGWHSRPLIAASAWQ 36 69999******************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence |
MLLTLFSAEG YRVEENDGCL TLGWHSRPLI AASAWQVMPT AEATTANQPE NHVHVMDGLD 60 RRQSTQGKRG CGRDPWCPPR LILQRKKTGK KMNKEMEIGK GKHTGIEMDG YMNKTNRTGI 120 ERETPLAIWH SLTVQFLDNK SL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14920.1 | 2e-14 | GRAS family protein |