PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000704.1_g080.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 495aa MW: 54175.9 Da PI: 7.6209

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000704.1_g080.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.2	6.5e-32	280	335	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ Pav_sc0000704.1_g080.1.mk 280 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 335 68****************************************************97 PP
2	Myb_DNA-binding	40.2	7.6e-13	282	333	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v+a ++lGg t+k I + m g+t ++ks++qky+ Pav_sc0000704.1_g080.1.mk 282 RRCWSPDLHRRFVNALQMLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 333 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MASSPSELSL DCKPHSYSML LKSFGDLQAS HHHDQSQTQK LEEFLSRLEE ERLKIDAFKR 60 ELPLSMQLLT TAVEASRQQL QAYRANIQGP NRPVLEEFIP LKHSPTEGSE KTTNTTSDKA 120 NWMTSAQLWS QASDHINATK PQSITSPKET DIGFSVSPKL GLDAKQHRSY GGGAFHPFSK 180 DRNSCPSPTL RPLPELALAS PENNKAAEML MEDKIIKSCN SETTHENGMI NSSANNGNCS 240 EQAKLLANGG INNSNISEGQ TQTTTTTATN NQSQSQTHRK ARRCWSPDLH RRFVNALQML 300 GGSQVATPKQ IRELMKVDGL TNDEVKSHLQ KYRLHTRRPS PSPQAAGGPT PQLVVLGGIW 360 VPPEYANAAH NGPTALYSPH PGSHAPTHYC ATPMPQDFYT TQPPQQLHHH TLHHQLHVYR 420 ASTTSHTHSS PESDGRGAGG RSESIEDGKS DSSSWKGAES GGDQMNGGDH RKGGVASRRS 480 EDAEDSNGSQ ITLKF

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MASSPSELSL DCKPHSYSML LKSFGDLQAS HHHDQSQTQK LEEFLSRLEE ERLKIDAFKR  60
ELPLSMQLLT TAVEASRQQL QAYRANIQGP NRPVLEEFIP LKHSPTEGSE KTTNTTSDKA  120
NWMTSAQLWS QASDHINATK PQSITSPKET DIGFSVSPKL GLDAKQHRSY GGGAFHPFSK  180
DRNSCPSPTL RPLPELALAS PENNKAAEML MEDKIIKSCN SETTHENGMI NSSANNGNCS  240
EQAKLLANGG INNSNISEGQ TQTTTTTATN NQSQSQTHRK ARRCWSPDLH RRFVNALQML  300
GGSQVATPKQ IRELMKVDGL TNDEVKSHLQ KYRLHTRRPS PSPQAAGGPT PQLVVLGGIW  360
VPPEYANAAH NGPTALYSPH PGSHAPTHYC ATPMPQDFYT TQPPQQLHHH TLHHQLHVYR  420
ASTTSHTHSS PESDGRGAGG RSESIEDGKS DSSSWKGAES GGDQMNGGDH RKGGVASRRS  480
EDAEDSNGSQ ITLKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	1e-110	G2-like family protein