PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000691.1_g590.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 276aa    MW: 30483.8 Da    PI: 4.5494
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000691.1_g590.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.71.3e-088322348
                               -HHHHHHHHTTTS-HHHHHHHHHHHT CS
            Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                               +W++Ia ++  gRt++++k++w+++l
  Pav_sc0000691.1_g590.1.mk  8 RWSAIATHLD-GRTDNEIKNFWNTHL 32
                               4*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MSMLLFTRWS AIATHLDGRT DNEIKNFWNT HLKKKLIQMG FDPMTHQPRT DLFSGLSQLL  60
ALANLQDLMQ QYQPLDIDQH AATLQADQAA QLAKLQYMQH LLQSVAYISS GENFSQNRNT  120
ADTDMEAFNL LNSLVPSIKE NPLLNSSQLE NPSSFSLGYG GTSQPLHHQS LLPHDLAVAD  180
PQVPFSSLPS LNSDHEMGSN YTMVSQEDNP PHDHDDSPWF DKLLSPAPNS IPPTMTGTLI  240
SNPGGDVCCS TSSYGGRSSG SSSYWPELFL EDANYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34670.16e-40MYB family protein