PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000691.1_g110.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 377aa    MW: 41110.7 Da    PI: 7.0788
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000691.1_g110.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.3e-20195244255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                 y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  Pav_sc0000691.1_g110.1.mk 195 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 244
                                59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MAAIMDFYSS RALQSSSDPF RGELMEALEP FMKGASSSPP SSISTTPSPP STSNPFLPSF  60
PSTSSSPSYN NSYLSFSPSI PTTTTIHQPN LYQDGCSTSS SMTLFSDGFF EQQQQQQPGS  120
IGLNHLTPSQ IHQIQVQIQA QNQPNLAWQN YQIQQQQITL PENHHQSHTL SFLSPKPIPM  180
KQVGSSGSPP KPTKLYRGVR QRHWGKWVAE IRLPKNRTRL WLGTFDTAEE AALAYDKAAY  240
KLRGDFARLN FPHLRHNGSS VGGDFGEYKP LHSSVDAKLQ AICEGLAETQ KQGKAAGKPS  300
KRSSAAKAPA PPPEVKVETS SSPVMTDSDG SAGSSPLSDL TFADSTEFLP WENASGSEST  360
AMLEKYPSEI DWASILN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.11e-72ERF family protein