PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000689.1_g280.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GeBP
Protein Properties Length: 829aa    MW: 92592.3 Da    PI: 9.5737
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000689.1_g280.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573109.42.6e-34102196198
                     DUF573   1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskeh 84 
                                klfqr+ws++Dei++L+G+id+++k+ ++p++d+ af++f+kks++++v+k+ql +Kirr+KkK++++v+k   gk+ +  k+h
  Pav_sc0000689.1_g280.1.mk 102 KLFQRIWSDDDEITILKGMIDYTTKKVADPYSDMGAFHDFIKKSLKADVNKTQLQDKIRRIKKKYETNVAK---GKKYNPVKPH 182
                                579********************************************************************...999999**** PP

                     DUF573  85 dqkifelskkiWgs 98 
                                +qk f++skk+Wgs
  Pav_sc0000689.1_g280.1.mk 183 EQKLFDFSKKVWGS 196
                                ************95 PP
2DUF573116.61.4e-36420514198
                     DUF573   1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskeh 84 
                                klfqr+ws++Dei++L+G+id+ +k+g++p++d+ af++f+kks++++v+k+ql +KirrLKkK++++v+k   gk+ +  k+h
  Pav_sc0000689.1_g280.1.mk 420 KLFQRIWSDDDEIAILKGMIDYSTKKGADPYSDMGAFHDFIKKSLKADVNKTQLQDKIRRLKKKYEMNVAK---GKKYNPVKPH 500
                                579********************************************************************...999999**** PP

                     DUF573  85 dqkifelskkiWgs 98 
                                +qk+f+ls+k+Wgs
  Pav_sc0000689.1_g280.1.mk 501 EQKVFDLSNKVWGS 514
                                ************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 829 aa     Download sequence    
KCPFAAIEII NLPKALDKDT TYRYGSNSFK LHRSKDERGV IEELIVDLKL NQVLDRNVVK  60
LSGGELQRFA VAFVAGQKAD IYMFDEPSSY LDVKQRLKAG KKLFQRIWSD DDEITILKGM  120
IDYTTKKVAD PYSDMGAFHD FIKKSLKADV NKTQLQDKIR RIKKKYETNV AKGKKYNPVK  180
PHEQKLFDFS KKVWGSGEGS IGLSGLSEQS KSNGKARTNQ KGNNKTLASL KAELLSSPER  240
PKECEKVDFG LKPCGSESLS EVIGFDKGFR ELGLPEGVVK QGLELIGGAK RAELKEKWKK  300
LHVAELELFV KRSELMRDQA KPQSSSSGSE SESESDSELD KDMVVKPIAS KPMEETPKTK  360
KPRSKASATT TPAARAGSKR PSESDPKDSK RPKKKIPDPD QEPDHAGEET KKAGGDDSKK  420
LFQRIWSDDD EIAILKGMID YSTKKGADPY SDMGAFHDFI KKSLKADVNK TQLQDKIRRL  480
KKKYEMNVAK GKKYNPVKPH EQKVFDLSNK VWGSGEGSIG VGGLSEQSKS NGKARTNQKG  540
NNKTLASLKA ELLSSPERPK ECEKVDFGLK PCGSESLSEV IGFDKGFREL GLPEGVVKQG  600
LELIGGAKRA ELKEKWKKLH VAELELFVKR SELMRDQAKV AETPQESGEE IETYAWYRYP  660
SMTKTLGEFK LQVIEGKFTN SQIIVMLGEN GSGKTTFMRM LVGLSKPDSG IEIPELHVSY  720
KNQKINPKHA TKVKDLLHEK ICDSCTHPQF VTDVMKPLHI GQLMDQEITK LSGGELQRVA  780
LCVCLRKLCN VLDKAELPAG MPTNDRRGFF ACEYIGDCCF CLNECVQPM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.12e-26GeBP family protein