PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000663.1_g400.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 79aa    MW: 9181.68 Da    PI: 10.9248
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000663.1_g400.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.67.3e-1618783698
                               EEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                         B3 36 ltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                               ++      rsW vkli+ ++ g+  l++GW+ F k+n Lk gD+++F+l+++++  lvv +fr
  Pav_sc0000663.1_g400.1.mk 18 IVRLWVGDRSWPVKLIFHRNNGQ--LSAGWRAFSKENSLKKGDVCIFELINTNNVALVVNIFR 78
                               33344567*********888888..9************************999999****997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    
MNVPTSFRKH FTTMETQIVR LWVGDRSWPV KLIFHRNNGQ LSAGWRAFSK ENSLKKGDVC  60
IFELINTNNV ALVVNIFRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.11e-16B3 family protein