PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000659.1_g120.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 292aa    MW: 32138.8 Da    PI: 6.0537
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000659.1_g120.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-183181155
                        AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                               +++ GVr+++ +g+WvAeI+d      k+ r +lg+f taeeAa+a+++a+  l+g
  Pav_sc0000659.1_g120.1.mk 31 CKFVGVRQRP-SGKWVAEIKDtT----KKIRMWLGTFETAEEAARAYDEAAYLLRG 81
                               799*******.7*********33....36**********************99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MEEEHEEAPK QQKEKGVSVS ANKQSKLKTK CKFVGVRQRP SGKWVAEIKD TTKKIRMWLG  60
TFETAEEAAR AYDEAAYLLR GSNTRTNFST HVPSNSPLSL KIRNLLNHKK SLNLKQKQSS  120
PPTPNSSLKS TSIAATTTRI SSSSSICSSN VQAFSDTSSA NCNANSSSSL PCYKSQDIQA  180
FDDAYRPDLS NCIGELQPAM FHLDQSWPFL AGFDQLPLTH EGMDFTKGVG NVAAAEAEAE  240
AEVTEFERLK VERQISASIY AMNGGNEYVD NEYDGSDALW DLPTLSQLFC LG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-30ERF family protein