PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000659.1_g090.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 285aa    MW: 31000.2 Da    PI: 6.4513
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000659.1_g090.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.61.2e-172269148
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                               rg+WT+eEdell +++k+ G g+W+t +++ g+ R++k+c++rw +yl
  Pav_sc0000659.1_g090.1.mk 22 RGPWTPEEDELLSNYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 69
                               89******************************99************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MQKLNLHKKK GRETISEVGL KRGPWTPEED ELLSNYIKKE GEGRWRTLPK RAGLLRCGKS  60
CRLRWMNYLR PSVKRGQIAP DEEDLILRLH RLLGNRSNTN PSPPPTSEPV AHHHGAAANT  120
DGNNGNIVTN ISNKENGYLV DDQELGTMVH GYANMTSSDH ASAAAMGTLS LRSSSSNHGG  180
ALLGGNEEDD DMNCCADDVF SSFLNSLINE DPFSGQHHLQ QQVLLQNGNN AHNAAGADGS  240
DHHVPLISSG AGATAPSTFG WESAVLMSSA FIQNDHHRVL NDQTE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.17e-46MYB family protein