PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000648.1_g330.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 180aa MW: 20692.8 Da PI: 10.7526 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 71.2 | 2.3e-22 | 18 | 104 | 4 | 90 |
FAR1 4 neYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 + + +vGF vr+ + ++s +g++ r++ C+k+g++ ++k k e+++r++ r gC+a++ vk+ek+gkw+vt+++++HnH Pav_sc0000648.1_g330.1.mk 18 DYFLIKVGFVVRVMQRRRSGIDGRTLARRLGCNKQGFSPNQKGKFGPEKKPRPSAREGCNATILVKMEKSGKWVVTRFVQDHNH 101 556679**************************************9*************************************** PP FAR1 88 ela 90 +l+ Pav_sc0000648.1_g330.1.mk 102 PLV 104 *96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
MKARRRSSAS DISPKHFDYF LIKVGFVVRV MQRRRSGIDG RTLARRLGCN KQGFSPNQKG 60 KFGPEKKPRP SAREGCNATI LVKMEKSGKW VVTRFVQDHN HPLVVTASGF STAGDKDRKI 120 EELMMELERQ DQLCAGYREK LLSFMNNVEA ETEELSEKIQ VIVDNVRKVE SEVQKHSRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G12850.1 | 3e-62 | FAR1 family protein |