PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000638.1_g100.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 437aa MW: 48186.8 Da PI: 6.6163

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000638.1_g100.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.9	9.8e-18	160	206	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd +l+++vkq+G + W+ Ia+++ gR +kqc++rw+++l Pav_sc0000638.1_g100.1.mk 160 KGQWTDEEDRKLIRLVKQHGVRKWAQIAEKLV-GRAGKQCRERWHNHL 206 799***************************.***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MEGEREGEEG GGGYGVYGLI NNTQPYHPHH HHQNIHRPGP PLTAIDRFLW GSQSNLSHQN 60 NPSSKENVVS TNGLCGFSSF GGAIGHEASC WPSYGAGAQY PQEVSFLDGL LGDHGEALMM 120 AWSGQAEQNP NTGFIEEAKV SERRVGKRAR KGLPAAALIK GQWTDEEDRK LIRLVKQHGV 180 RKWAQIAEKL VGRAGKQCRE RWHNHLRPDI KSSILQNYIR SKNLMSNNNN KNNNNSSPNV 240 STISNNTPTS SSTLSHENPS KTHLNILATE PSDQSTTSNC CDSPLNLGDT LYNDEELHFM 300 QTFFTNNVQT FNPHQQHPSH SIDSSNNSNN IGLIVSPVEP IQNAINPTTS TTPTPLYSDL 360 YLSYLLNGSA NSSSSFSSTD HHHLGFYNTS MEYLMAHDQY HEAAAAAAAS SNERREMDLI 420 EMVSSSQFAQ GTNRTSF

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MEGEREGEEG GGGYGVYGLI NNTQPYHPHH HHQNIHRPGP PLTAIDRFLW GSQSNLSHQN  60
NPSSKENVVS TNGLCGFSSF GGAIGHEASC WPSYGAGAQY PQEVSFLDGL LGDHGEALMM  120
AWSGQAEQNP NTGFIEEAKV SERRVGKRAR KGLPAAALIK GQWTDEEDRK LIRLVKQHGV  180
RKWAQIAEKL VGRAGKQCRE RWHNHLRPDI KSSILQNYIR SKNLMSNNNN KNNNNSSPNV  240
STISNNTPTS SSTLSHENPS KTHLNILATE PSDQSTTSNC CDSPLNLGDT LYNDEELHFM  300
QTFFTNNVQT FNPHQQHPSH SIDSSNNSNN IGLIVSPVEP IQNAINPTTS TTPTPLYSDL  360
YLSYLLNGSA NSSSSFSSTD HHHLGFYNTS MEYLMAHDQY HEAAAAAAAS SNERREMDLI  420
EMVSSSQFAQ GTNRTSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58850.1	1e-27	MYB family protein