PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000636.1_g410.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 798aa MW: 91858.9 Da PI: 7.124

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000636.1_g410.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.8	2.8e-26	65	150	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 fY++YAk+vGF + k +s++s+ ++e+++++f C ++g++++++++ ++r++ ++gCka+++vk++ +g+w+v+++++eH Pav_sc0000636.1_g410.1.mk 65 FYKAYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDA----INPRPSPKIGCKASMHVKRRPNGNWYVYSFVKEH 144 **************************************999877....9***************************** PP FAR1 86 nHelap 91 nHel p Pav_sc0000636.1_g410.1.mk 145 NHELLP 150 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 798 aa Download sequence
MFMGPMKTFR PFASAFEGEV HGGCRVDLNF PTTLMDSNTL TLTATSTLEP HDAMEFESHE 60 AAYTFYKAYA KSVGFGTAKL SSRRSRASKE FIDAKFSCIR YGNKQQSDDA INPRPSPKIG 120 CKASMHVKRR PNGNWYVYSF VKEHNHELLP AQAHFFRSHR NTDPLNNDVR IRRRKNLAAV 180 SSLFSAYQNV DCLESYLRNQ HDKGRSLVLE AGDAQVLLEY FICMQEENPK FFYAVDLNEE 240 HRLRNVFWVD AKGMEDYTNF NDVVFFDTTY FTNKYKIPLV LFIGVNHHIQ PTLLGCALIA 300 DETVYTFVWL MQTWFIAMGE QAPRVILTDQ NNAIKAAIAA VFPGTSHCFC LWHIMEKIHR 360 HLEFLSMWHD SFVGKFNKCI FKSWSEQQFE KRWWKLLDRF NLREVEWMQS LYEDRTHWVP 420 TFMRDISFAG LSPTSRSESL NSSFDKYIQG ETSLREFMER YRVILEDRYE EEAKSNFDAW 480 HETPELKSPS PFEKQMSLVY THEVFKNFQV EVLGAAACHL KKENEDGMST TYSVKDFEDN 540 QNYVVEWNES KSDIYCSCHS FEYKGYLCRH AIVVLQMSGV FTIPSKYILQ RWTNAAMSRH 600 AIGERLDEVQ SKVRRYNDLC RRAIILGEEG SLSQESYDVA LCAIKEALKQ CASLNNVVEN 660 NAKPNDPAIH GICGVDEENQ CSTASGDKLF GPKVSNANKT PRRAGSGKEV ARNENTASKK 720 GKVPQLEATS VGTQDGFHQM KIEQNRVIDA CYMWQQLPDT RAMQLRNAVP STMFQNVASA 780 AQFHNVVSTH VHENHLPQ

Sequence ? help Back to Top

Protein Sequence Length: 798 aa Download sequence

MFMGPMKTFR PFASAFEGEV HGGCRVDLNF PTTLMDSNTL TLTATSTLEP HDAMEFESHE  60
AAYTFYKAYA KSVGFGTAKL SSRRSRASKE FIDAKFSCIR YGNKQQSDDA INPRPSPKIG  120
CKASMHVKRR PNGNWYVYSF VKEHNHELLP AQAHFFRSHR NTDPLNNDVR IRRRKNLAAV  180
SSLFSAYQNV DCLESYLRNQ HDKGRSLVLE AGDAQVLLEY FICMQEENPK FFYAVDLNEE  240
HRLRNVFWVD AKGMEDYTNF NDVVFFDTTY FTNKYKIPLV LFIGVNHHIQ PTLLGCALIA  300
DETVYTFVWL MQTWFIAMGE QAPRVILTDQ NNAIKAAIAA VFPGTSHCFC LWHIMEKIHR  360
HLEFLSMWHD SFVGKFNKCI FKSWSEQQFE KRWWKLLDRF NLREVEWMQS LYEDRTHWVP  420
TFMRDISFAG LSPTSRSESL NSSFDKYIQG ETSLREFMER YRVILEDRYE EEAKSNFDAW  480
HETPELKSPS PFEKQMSLVY THEVFKNFQV EVLGAAACHL KKENEDGMST TYSVKDFEDN  540
QNYVVEWNES KSDIYCSCHS FEYKGYLCRH AIVVLQMSGV FTIPSKYILQ RWTNAAMSRH  600
AIGERLDEVQ SKVRRYNDLC RRAIILGEEG SLSQESYDVA LCAIKEALKQ CASLNNVVEN  660
NAKPNDPAIH GICGVDEENQ CSTASGDKLF GPKVSNANKT PRRAGSGKEV ARNENTASKK  720
GKVPQLEATS VGTQDGFHQM KIEQNRVIDA CYMWQQLPDT RAMQLRNAVP STMFQNVASA  780
AQFHNVVSTH VHENHLPQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.1	0.0	FAR1 family protein