PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000622.1_g770.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 378aa MW: 42070.2 Da PI: 4.3122

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000622.1_g770.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	80.8	2.8e-25	10	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknrat 78 lp+Gf+F+P+d++l+ +yL +kv+g+++ e+vi+e+d+y k+ePwd+ + + a+ +++yfF+k ++ + +++r r++ Pav_sc0000622.1_g770.1.br 10 LPVGFKFRPRDDQLLGYYLLNKVRGTSFMYENVIPEMDLYgKIEPWDIWHeygghN-LATGEDLYFFTKLKSLSDKDSRVARTI 92 79***********************99999**99568*74244422.2356689**************** PP NAM 79 ksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 sg+Wk + ++v + ++++ g+ k + + + ++ + +W+mhey+l Pav_sc0000622.1_g770.1.br 93 GSGTWKGENSGTTVSDPtnEENDLGIWKRFHYE--NPKSVQDGSWIMHEYSL 142 **999999999886667779999999887..66666799*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MAPSESVVNL PVGFKFRPRD DQLLGYYLLN KVRGTSFMYE NVIPEMDLYG KIEPWDIWHE 60 YGGHNLATGE DLYFFTKLKS LSDKDSRVAR TIGSGTWKGE NSGTTVSDPT NEENDLGIWK 120 RFHYENPKSV QDGSWIMHEY SLHPSLVKPK PNTTNQFVLC RIRKNDKGKR KLRTAEEDNE 180 TDTPVQSQNK RQRPQQVTSF EEFIGNCTPM SEATGIGGSV SYLPTGLTQS QPDSSFVYTT 240 TVVSSQARAN YTDDVSQFGG GGDGDALMSD FSNLDTAQPF TEQALGSYAA CDQERASDVY 300 ETQQGLGNNI GYWPSPFGSE EDQVNALECS IDYDLLIHLI NCDDDNDGPR QSSTAQFMGM 360 GMENTTTASS EANMVIID

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MAPSESVVNL PVGFKFRPRD DQLLGYYLLN KVRGTSFMYE NVIPEMDLYG KIEPWDIWHE  60
YGGHNLATGE DLYFFTKLKS LSDKDSRVAR TIGSGTWKGE NSGTTVSDPT NEENDLGIWK  120
RFHYENPKSV QDGSWIMHEY SLHPSLVKPK PNTTNQFVLC RIRKNDKGKR KLRTAEEDNE  180
TDTPVQSQNK RQRPQQVTSF EEFIGNCTPM SEATGIGGSV SYLPTGLTQS QPDSSFVYTT  240
TVVSSQARAN YTDDVSQFGG GGDGDALMSD FSNLDTAQPF TEQALGSYAA CDQERASDVY  300
ETQQGLGNNI GYWPSPFGSE EDQVNALECS IDYDLLIHLI NCDDDNDGPR QSSTAQFMGM  360
GMENTTTASS EANMVIID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	2e-18	NAC family protein