PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000618.1_g390.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 179aa MW: 21174.6 Da PI: 9.9844 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 96.1 | 2.3e-30 | 51 | 150 | 1 | 95 |
EEEE-..-HHHHTT-EE--HHH.HTT.....---....--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkke..esktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkeg 77 f+kv tpsdv++++r+v+pk++ae+h + +e +++ l +ed +g++W+++++y+ +s++yvlt+GW +Fvk+++Lk+g Pav_sc0000618.1_g390.1.mk 51 FEKVATPSDVGRLNRMVIPKQHAEKHfplhlS--EElcKGVLLNFEDGEGKVWRFRYCYWSSSQSYVLTRGWTHFVKEKKLKAG 132 99***************************652..44448899****************************************** PP -EEEEEE-SSSEE..EEE CS B3 78 DfvvFkldgrsefelvvk 95 D+v F+++ +e+++++ Pav_sc0000618.1_g390.1.mk 133 DVVRFERSIGEEKKMFID 150 ******874466666665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence |
MLRKHSYTNE LEMYKLKLFN AGAGDGDAAR KRIKCHVNLM DGYDHQREWL FEKVATPSDV 60 GRLNRMVIPK QHAEKHFPLH LSEELCKGVL LNFEDGEGKV WRFRYCYWSS SQSYVLTRGW 120 THFVKEKKLK AGDVVRFERS IGEEKKMFID CRLRNVEVGG SERWLVGLKL KRGFKMMEW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68840.2 | 1e-55 | RAV family protein |