PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000597.1_g270.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 437aa MW: 49944.8 Da PI: 4.9841

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000597.1_g270.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.9	1e-35	14	104	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhks 85 Fl+k+y++++d++ ++++swse+g sfvv+d++efak++Lp yFkh+nf+SFvRQLn+YgF+k++ e+ weF++++ Pav_sc0000597.1_g270.1.mk 14 FLTKTYDLVDDPSSNHVVSWSETGCSFVVWDPTEFAKEMLPMYFKHNNFSSFVRQLNTYGFRKIDPEQ---------WEFANEE 88 9*************************************************************9998.........*** PP XXXXXXXXXXXXXXXX CS HSF_DNA-bind 86 Fkkgkkellekikrkk 101 F +g ++ll++i+r+k Pav_sc0000597.1_g270.1.mk 89 FLRGGRHLLKNIHRRK 104 ************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MEGTQGGSNA PAPFLTKTYD LVDDPSSNHV VSWSETGCSF VVWDPTEFAK EMLPMYFKHN 60 NFSSFVRQLN TYGFRKIDPE QWEFANEEFL RGGRHLLKNI HRRKPIHSHS TQNHEYSSVP 120 LSETEREEYE KKINRLNHEK SLLELELQRH QRENQEFDYQ IQILQEQLQK MEHQQKQYTS 180 FLAELLQKPG LASILMQKSD IHNKKRRLLK SSQFPDDFKM EILNLNTQNE NLGTISTPVI 240 KLDQLEMMES SLNFWEDFLH GIGEAMPEEV NDIGSLSQAS PIIVTEIQDP GMNSRPCSPR 300 SHLSSPNSMN VSSPEVIGSA NFLDILAITS TCHNVDFRPK SSGIDMNSKP DSAPATEALK 360 ERVQEMKNAM PAAANDMFWE QCLTETPGLD DAQEVQSERG DSDGRVSDTN PAIQKKLWWN 420 TDVDNFTNQI GRLTHAS

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MEGTQGGSNA PAPFLTKTYD LVDDPSSNHV VSWSETGCSF VVWDPTEFAK EMLPMYFKHN  60
NFSSFVRQLN TYGFRKIDPE QWEFANEEFL RGGRHLLKNI HRRKPIHSHS TQNHEYSSVP  120
LSETEREEYE KKINRLNHEK SLLELELQRH QRENQEFDYQ IQILQEQLQK MEHQQKQYTS  180
FLAELLQKPG LASILMQKSD IHNKKRRLLK SSQFPDDFKM EILNLNTQNE NLGTISTPVI  240
KLDQLEMMES SLNFWEDFLH GIGEAMPEEV NDIGSLSQAS PIIVTEIQDP GMNSRPCSPR  300
SHLSSPNSMN VSSPEVIGSA NFLDILAITS TCHNVDFRPK SSGIDMNSKP DSAPATEALK  360
ERVQEMKNAM PAAANDMFWE QCLTETPGLD DAQEVQSERG DSDGRVSDTN PAIQKKLWWN  420
TDVDNFTNQI GRLTHAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45710.1	1e-78	HSF family protein